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f610331bb1 Ed H*0001 #! /usr/bin/env bash
2ff82eb834 Ed H*0002
0003 usage()
0004 {
0005 echo
0006 echo "Usage: $0 [OPTIONS]"
0007 echo
0008 echo "where possible OPTIONS are:"
0009 echo " (-help|-h) print usage"
ee57712ddb Jean*0010 echo " ---- type of test : ----"
b4daa24319 Shre*0011 echo " (-tlm) perform a Tangent-Linear run (defaut: using TAF)"
0012 echo " (-adm|-ad) perform an Adjoint run (default: using TAF)"
0013 echo " (-tap) use Tapenade for Adjoint or Tangent-Linear run"
ee57712ddb Jean*0014 echo " (-oad) perform an OpenAD adjoint run"
9d0c386f0c dngo*0015 echo " (-oadsingularity|-oadsngl) STRING"
0016 echo " path to singularity container with OpenAD"
616bf911ff Jean*0017 echo " (-mth) run multi-threaded (using eedata.mth)"
d9ae4e2b34 Jean*0018 echo " (-mpi) use MPI to compile and run on 2 processors"
0019 echo " (-MPI) NUMBER use MPI to compile and run on max NUMBER procs"
bbea11a65d Jean*0020 echo " (-mfile|-mf) STRING MPI: file with list of possible machines to run on"
442de1f446 Jean*0021 echo " (-command|-c) STRING command to run (e.g., if non-standard MPI setting)"
0022 echo " DEF='mitgcmuv' or ='mpirun -np TR_NPROC mitgcmuv'"
ee57712ddb Jean*0023 echo " ---- testing options : ----"
e355dad078 Jean*0024 echo " (-optfile|-of) STRING optfile to use"
5a67953813 Jean*0025 echo " (-fast) use optfile default for compiler flags (no '-ieee')"
0026 echo " DEF=off => use IEEE numerics option (if available)"
0027 echo " (-devel) use optfile developement flags (if available)"
232027f18d Jean*0028 echo " (-gsl) compile with \"-gsl\" flag"
416e70d1a2 Jean*0029 echo " (-use_r4|-ur4) if allowed, use real*4 type for '_RS' variable"
0030 echo " (-tdir|-t) STRING list of group and/or exp. dirs to test"
35aa6741f4 Jean*0031 echo " (recognized groups: basic, tutorials)"
0032 echo " (DEF=\"\" which test all)"
ef1af8ad10 Jean*0033 echo " (if list= 'start_from THIS_EXP' then"
0034 echo " test THIS_EXP + all the following)"
416e70d1a2 Jean*0035 echo " (-skipdir|-skd) STRING list of exp. dirs to skip"
6d0f07d5b0 Jean*0036 echo " (DEF=\"\" which test all)"
ee57712ddb Jean*0037 echo " (-ts) provide timing information per timestep"
0038 echo " (-papis) provide MFlop/s per timestep using PAPI"
0039 echo " (-pcls) provide MFlop/s per timestep using PCL"
0040 echo " ---- system options : ----"
0041 echo " (-bash|-b) STRING preferred location of a \"bash\" or \"sh\" shell"
002054e5e5 Ed H*0042 echo " (DEF=\"\" for \"bash\")"
ee57712ddb Jean*0043 echo " (-ef) STRING used as genmake2 \"-extra_flag\" argument"
e977410d1b Mart*0044 echo " (-ncad) use genmake2 option \"-nocat4ad\" (-ncad)"
0045 echo " (-small_f) make target small_f before making target all"
ca2316a28b Jean*0046 echo " (-makedepend|-md) STRING command to use for \"makedepend\""
416e70d1a2 Jean*0047 echo " (-make|-m) STRING command to use for \"make\""
fd381e7ade Ed H*0048 echo " (DEF=\"make\")"
ee57712ddb Jean*0049 echo " (-j) JOBS use \"make -j JOBS\" for parallel builds"
0050 echo " ---- output options : ----"
aaf4336666 Jean*0051 echo " (-match) NUMBER Matching Criteria (number of digits)"
ca2316a28b Jean*0052 echo " (DEF=\"$MATCH_CRIT\")"
13cadcbe59 Oliv*0053 echo " (-pass) return non-zero exit code if any exp do not pass"
ee57712ddb Jean*0054 echo " (-odir) STRING used to build output directory name"
0055 echo " (DEF=\"hostname\")"
0056 echo " (-addr|-a) STRING list of email recipients"
0057 echo " (DEF=\"\" no email is sent)"
0058 echo " (-send) STRING sending command (instead of using mpack)"
0059 echo " (-savdir|-sd) STRING location to save output tar file to send (DEF='$SAVDIR')"
0060 echo " (-mpackdir|-mpd) DIR location of the mpack utility"
0061 echo " (DEF=\"../tools/mpack-1.6\")"
0062 echo " -- do only some parts: --"
bbea11a65d Jean*0063 echo " (-clean) *ONLY* run \"make CLEAN\" & clean run-dir"
ca6d5f1072 Jean*0064 echo " (-norun|-nr) skip the \"runmodel\" stage (stop after make)"
1f09e8610e Jean*0065 echo " (-obj) only produces objects (=norun & no executable)"
f6209765b3 Jean*0066 echo " (-src) only produces small '*.f' src files (not even obj)"
0067 echo " + with: '-adm/-tlm', also makes taf outp src code"
416e70d1a2 Jean*0068 echo " (-runonly|-ro) *ONLY* run stage (=\"-quick\" without make)"
a986ef8661 Cons*0069 echo " (-quick|-q) same as \"-nogenmake -noclean -nodepend\""
0070 echo " (-nogenmake|-ng) skip the genmake stage"
0071 echo " (-noclean|-nc) skip the \"make clean\" stage"
0072 echo " (-nodepend|-nd) skip the \"make depend\" stage"
bbea11a65d Jean*0073 echo " (-postclean|-pc) after each exp. test, clean build-dir & run-dir"
0074 echo " (-deloutp|-do) delete output files after successful run"
a986ef8661 Cons*0075 echo " (-deldir|-dd) on success, delete the output directory"
96d85cca71 Ed H*0076 echo
a18b9b1964 Ed H*0077 echo "and where STRING can be a whitespace-delimited list"
96d85cca71 Ed H*0078 echo "such as:"
a18b9b1964 Ed H*0079 echo
96d85cca71 Ed H*0080 echo " -t 'exp0 exp2 exp3' "
0081 echo " -addr='abc@123.com testing@home.org'"
2ff82eb834 Ed H*0082 echo
a18b9b1964 Ed H*0083 echo "provided that the expression is properly quoted within the current"
0084 echo "shell (note the use of single quotes to protect white space)."
0085 echo
2ff82eb834 Ed H*0086 exit 1
0087 }
0088
0089 # build the mpack utility
0090 build_mpack()
0091 {
e53112a6cf Ed H*0092 printf "building the mpack utility... "
d6829a17bc Jean*0093 MPACK="$MPACKDIR/mpack"
0094 if test ! -x $MPACK ; then
2ff82eb834 Ed H*0095 if test ! -d $MPACKDIR ; then
002054e5e5 Ed H*0096 echo
2ff82eb834 Ed H*0097 echo "Error: can't find \"$MPACKDIR\""
0098 echo " are you sure this program is being run in the correct "
0099 echo " (that is, \"MITGCM_ROOT\verification\") directory?"
002054e5e5 Ed H*0100 echo
0101 HAVE_MPACK=f
2ff82eb834 Ed H*0102 fi
2e69e179c3 Ed H*0103 if test "x$CC" = x ; then
0104 export CC=cc
0105 fi
63e0800ef7 Jean*0106 printf "building mpack (using CC=$CC)... "
54db3dc364 Ed H*0107 ( cd $MPACKDIR && ./configure && $MAKE ) > tr_build_mpack.out 2>&1
2ff82eb834 Ed H*0108 RETVAL=$?
0109 if test "x$RETVAL" != x0 ; then
0110 echo
0111 echo "Error building the mpack tools at: $MPACK_DIR"
002054e5e5 Ed H*0112 echo
0113 HAVE_MPACK=f
0114 else
54db3dc364 Ed H*0115 rm -f tr_build_mpack.out
002054e5e5 Ed H*0116 HAVE_MPACK=t
d6829a17bc Jean*0117 echo "done"
2ff82eb834 Ed H*0118 fi
002054e5e5 Ed H*0119 else
0120 HAVE_MPACK=t
d6829a17bc Jean*0121 echo "already exist"
2ff82eb834 Ed H*0122 fi
0123 }
0124
3f7ac1ee60 Jean*0125 testoutput_var()
2ff82eb834 Ed H*0126 {
6d41b7da3e Jean*0127 # testoutput_var dir s1 label subdir reference_output
2ff82eb834 Ed H*0128 #
9750e41317 Jean*0129 # compares 1 variable output selected from file $dir/$subdir/$OUTPUTFILE
6418c0ec62 Jean*0130 # with same output from reference file $dir/$reference_output
3f7ac1ee60 Jean*0131 # using search strings s1 and text label
2ff82eb834 Ed H*0132
0133 if [ $debug -gt 0 ]; then
d81415648f Jean*0134 echo testoutput_var: grep "'$2'" $1/$4/$OUTPUTFILE 1>&2
2ff82eb834 Ed H*0135 fi
84370bfea3 Jean*0136 if [ -r $1/$4/$OUTPUTFILE ]; then
deb0ad3aea Mart*0137 grep "$2" $1/$4/$OUTPUTFILE | sed 's/.*=//' | nl > ${TMP}a.txt
ee57712ddb Jean*0138 lncntA=`wc -l ${TMP}a.txt | awk '{print $1}' `
c5e604105c Jean*0139 if [ $lncntA -lt 2 ]; then
2ff82eb834 Ed H*0140 if [ $verbose -gt 0 ]; then
0141 echo Not enough lines of output when searching for "$2" 1>&2
0142 fi
ee57712ddb Jean*0143 rm -f ${TMP}a.txt ; return 99
2ff82eb834 Ed H*0144 fi
0145 else
3f7ac1ee60 Jean*0146 echo testoutput_var: $OUTPUTFILE from model run was not readable 1>&2
2ff82eb834 Ed H*0147 return 99
0148 fi
0149 if [ $debug -gt 0 ]; then
d81415648f Jean*0150 echo testoutput_var: grep "'$2'" $1/$5 1>&2
2ff82eb834 Ed H*0151 fi
deb0ad3aea Mart*0152 grep "$2" $1/$5 | sed 's/.*=//' | nl > ${TMP}b.txt
ee57712ddb Jean*0153 lncntB=`wc -l ${TMP}b.txt | awk '{print $1}' `
c5e604105c Jean*0154 if [ $lncntB -lt 2 ]; then
2ff82eb834 Ed H*0155 if [ $verbose -gt 0 ]; then
0156 echo Not enough lines of output when searching for "$2" 1>&2
0157 fi
ee57712ddb Jean*0158 rm -f ${TMP}a.txt ${TMP}b.txt ; return 99
2ff82eb834 Ed H*0159 fi
ce680526d4 Jean*0160 if [ $lncntA -ne $lncntB ]; then
6418c0ec62 Jean*0161 if [ $verbose -gt 0 ]; then
0162 echo Not same Nb of lines when searching for "$2" ":" $lncntA $lncntB 1>&2
0163 fi
ee57712ddb Jean*0164 rm -f ${TMP}a.txt ${TMP}b.txt ; return 99
ce680526d4 Jean*0165 fi
ee57712ddb Jean*0166 has_nan=`cat ${TMP}a.txt | grep -i nan | wc -l`
ef3ea31c23 Ed H*0167 if [ $has_nan -gt 0 ] ; then
3f7ac1ee60 Jean*0168 echo testoutput_var: $OUTPUTFILE contains $has_nan NaN values 1>&2
ee57712ddb Jean*0169 rm -f ${TMP}a.txt ${TMP}b.txt ; return 99
ef3ea31c23 Ed H*0170 fi
ee57712ddb Jean*0171 has_inf=`cat ${TMP}a.txt | grep -i inf | wc -l`
ef3ea31c23 Ed H*0172 if [ $has_inf -gt 0 ] ; then
3f7ac1ee60 Jean*0173 echo testoutput_var: $OUTPUTFILE contains $has_inf Inf values 1>&2
ee57712ddb Jean*0174 rm -f ${TMP}a.txt ${TMP}b.txt ; return 99
7bcfb3f76d Jean*0175 fi
2ff82eb834 Ed H*0176 if [ $debug -gt 0 ]; then
ee57712ddb Jean*0177 echo testoutput_var: join ${TMP}a.txt ${TMP}b.txt 1>&2
2ff82eb834 Ed H*0178 fi
ee57712ddb Jean*0179 # On the SGI O3K (*not* the O2K), "cat -n" inserts a ":" after the line number
0180 join ${TMP}a.txt ${TMP}b.txt | awk '{print $1 " " $2 " " $3}' | sed -e 's|:||g' > ${TMP}c.txt
2ff82eb834 Ed H*0181 if [ $debug -gt 0 ]; then
3f7ac1ee60 Jean*0182 echo testoutput_var: compare_lines 1>&2
2ff82eb834 Ed H*0183 fi
cfc62862f0 Ed H*0184 if [ $verbose -gt 1 ]; then
ee57712ddb Jean*0185 cat ${TMP}c.txt 1>&2
cfc62862f0 Ed H*0186 fi
ee57712ddb Jean*0187 echo "-1" >> ${TMP}c.txt
0188 digits_of_similarity=`./tr_cmpnum < ${TMP}c.txt`
2ff82eb834 Ed H*0189 if [ $digits_of_similarity -eq 99 ]; then
0190 if [ $verbose -gt 0 ]; then
6d41b7da3e Jean*0191 echo testoutput_var: No comparison was available for \"$3\" 1>&2
2ff82eb834 Ed H*0192 fi
0193 digits_of_similarity=99
0194 else
0195 if [ $verbose -gt 0 ]; then
6d41b7da3e Jean*0196 echo There were $digits_of_similarity decimal places of similarity for \"$3\" 1>&2
2ff82eb834 Ed H*0197 fi
0198 fi
ee57712ddb Jean*0199 rm -f ${TMP}a.txt ${TMP}b.txt ${TMP}c.txt
9750e41317 Jean*0200
2ff82eb834 Ed H*0201 return $digits_of_similarity
0202 }
0203
3f7ac1ee60 Jean*0204 testoutput_run()
2ff82eb834 Ed H*0205 {
6d41b7da3e Jean*0206 # testoutput_run directory subdir reference_output
2ff82eb834 Ed H*0207 #
3f7ac1ee60 Jean*0208 # test output from 1 run in "directory"
456c314cce Jean*0209 # --> same processing for adjoint & forward test
6418c0ec62 Jean*0210 # default list of output variables to be checked:
0211 # 1rst : main variable used to decide if it pass or FAIL
0212 # others : number of matching digits to be printed in summary.txt
0213 listChk=$DEF_CHECK_LIST
eb7e5e62ed Jean*0214 # load experiment-specific list from file "tr_checklist" (if it exist)
6418c0ec62 Jean*0215 if test -r $1/$2/tr_checklist ; then listChk=`cat $1/$2/tr_checklist` ; fi
b4daa24319 Shre*0216 if test $KIND = 1 -o $KIND = 4 ; then kd='g_';
d81415648f Jean*0217 # TLM use same input_ad/tr_checklist --> convert
c59dd234b1 Jean*0218 listChk=`echo $listChk | sed 's/^adm/tlm/' | sed 's/ adm/ tlm/g'`
0219 if test -r $1/$2/tr_checklist.tlm ; then listChk=`cat $1/$2/tr_checklist.tlm` ; fi
b4daa24319 Shre*0220 elif test $KIND = 2 -o $KIND = 5 ; then kd='ad';
d81415648f Jean*0221 if test -r $1/$2/tr_checklist.adm ; then listChk=`cat $1/$2/tr_checklist.adm` ; fi
b4daa24319 Shre*0222 elif test $KIND = 6 ; then kd='ad';
d81415648f Jean*0223 else kd=''; fi
0224 if [ $debug -gt 0 ]; then echo "testoutput_run: listChk='$listChk'" 1>&2 ; fi
6418c0ec62 Jean*0225 # remove 1rst var and expand the list: + => min max mean s.d
d81415648f Jean*0226 sVar=`echo $listChk | awk '{print $1}'`
6418c0ec62 Jean*0227 listVar=`echo $listChk | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' \
0228 | sed 's/+//g' | sed "s/^$sVar//"`
0229 # set ref.outp file-name and, if compressed, uncompress it into subdir
0230 refoutp=results/$3
0231 if test ! -r $1/results/$3 ; then
0232 if test -r $1/results/${3}.gz ; then
0233 tmpNam1=$3
0234 tmpNam2=`echo $tmpNam1 | sed 's/\..*\././'`
0235 if test "x$tmpNam1" = "x$tmpNam2" ; then
0236 tmpNam1=`echo $tmpNam2 | sed 's/\./.std./'`
0237 fi
0238 refoutp=$2/$tmpNam1
0239 if [ $debug -gt 0 ]; then
0240 echo "testoutput_run: gunzip 'results/$3.gz' into '$refoutp'" 1>&2
0241 fi
0242 gzip -cd $1/results/${3}.gz > $1/$refoutp
0243 else
0244 echo "missing reference output file '$3' (.gz) in '$1/results/'"
0245 fi
0246 fi
0247 # check for ptracer output in reference_output file :
0248 if test $KIND = 0 ; then
0249 ptr_mon="trcstat_ptracerXX_min trcstat_ptracerXX_max"
0250 ptr_mon="$ptr_mon trcstat_ptracerXX_mean trcstat_ptracerXX_sd"
0251 for ii in $PTRACERS_NUM ; do
bef69cc95f Jean*0252 ptrfound=0
0253 for jj in $ptr_mon ; do
0254 name=`eval "echo $jj | sed -e 's|XX|0"$ii"|g'"`
6418c0ec62 Jean*0255 tst=`grep $name $1/$refoutp | wc -l | awk '{print $1}'`
bef69cc95f Jean*0256 if test ! "x$tst" = x0 ; then ptrfound=1 ; fi
0257 done
0258 if test $ptrfound = '1' ; then
0259 eval "HAVE_PTR0"$ii"=t"
0260 else
0261 eval "HAVE_PTR0"$ii"=f"
0262 # remove this ptr from the list of output variable to check
0263 # echo "-- ptr test=" $tst "number of var=" `echo $listVar | awk '{print NF}'` 1>&2
0264 listVar=`echo "$listVar" | sed "s/ pt$ii..//g"`
0265 fi
6418c0ec62 Jean*0266 # eval 'echo "HAVE_PTR0'$ii' = $HAVE_PTR0'$ii'"' 1>&2
0267 done
0268 fi
0269 tst=`echo $sVar $listVar | awk '{ for(i=2;i<=NF;i++){if($i==$1)t+=1}; print t }'`
0270 if test $tst != 1 ; then
0271 if test $tst = 0 ; then echo "==> WARNING: selected var >$sVar< not found" 1>&2
0272 else echo "==> WARNING: found selected var >$sVar< $tst times" 1>&2 ; fi
0273 echo "==> WARNING: in checked list:" $listVar 1>&2
0274 #- put it back once:
0275 listVar=" $sVar "`echo "$listVar " | sed "s/ $sVar / /g"`
0276 fi
d81415648f Jean*0277 if [ $debug -gt 0 ]; then echo "testoutput_run: listVar='$listVar'" 1>&2 ; fi
d9ae4e2b34 Jean*0278 echo "listVar='$listVar'" >> $locDIR"/summary.txt"
6418c0ec62 Jean*0279 #---
0280 allargs=""
0281 for xx in $listVar
0282 do
7ee8179b2a Jean*0283 #ii=`echo $xx | sed 's/^pt[0-9][0-9]*..$/XXX/'` #- any ptr number
0284 ii=`echo $xx | sed 's/^pt[1-9]..$/XXX/'` #- 1 to 9 ptr number
0285 if test $ii != 'XXX' ; then
0286 #- all except ptracer stats:
0287 case $xx in
eb7e5e62ed Jean*0288 'PS') if [ $debug -gt 0 ]
0289 then echo testoutput_run: testoutput_var $1 cg2d_init_res 1>&2 ; fi
6418c0ec62 Jean*0290 testoutput_var $1 "cg2d_init_res" "Press. Solver (cg2d)" $2 $refoutp ; yy=$?
eb7e5e62ed Jean*0291 if [ $debug -gt 0 ] ; then echo testoutput_run: cg2dres=$yy 1>&2 ; fi ;;
d81415648f Jean*0292 'admCst') testoutput_var $1 "ADM ref_cost_function" "ADM CostFct" $2 $refoutp ; yy=$? ;;
0293 'admGrd') testoutput_var $1 "ADM adjoint_gradient" "ADM Ad Grad" $2 $refoutp ; yy=$? ;;
0294 'admFwd') testoutput_var $1 "ADM finite-diff_grad" "ADM FD Grad" $2 $refoutp ; yy=$? ;;
6418c0ec62 Jean*0295 'tlmCst') testoutput_var $1 "TLM ref_cost_function" "TLM CostFct" $2 $refoutp ; yy=$? ;;
0296 'tlmGrd') testoutput_var $1 "TLM tangent-lin_grad" "TLM TL Grad" $2 $refoutp ; yy=$? ;;
d81415648f Jean*0297 'tlmFwd') testoutput_var $1 "TLM finite-diff_grad" "TLM FD Grad" $2 $refoutp ; yy=$? ;;
0298 'Tmn') testoutput_var $1 "dynstat_${kd}theta_min" "${kd}Theta minimum" $2 $refoutp ; yy=$? ;;
0299 'Tmx') testoutput_var $1 "dynstat_${kd}theta_max" "${kd}Theta maximum" $2 $refoutp ; yy=$? ;;
0300 'Tav') testoutput_var $1 "dynstat_${kd}theta_mean" "${kd}Theta mean" $2 $refoutp ; yy=$? ;;
0301 'Tsd') testoutput_var $1 "dynstat_${kd}theta_sd" "${kd}Theta Std.Dev" $2 $refoutp ; yy=$? ;;
0302 'Smn') testoutput_var $1 "dynstat_${kd}salt_min" "${kd}Salt minimum" $2 $refoutp ; yy=$? ;;
0303 'Smx') testoutput_var $1 "dynstat_${kd}salt_max" "${kd}Salt maximum" $2 $refoutp ; yy=$? ;;
0304 'Sav') testoutput_var $1 "dynstat_${kd}salt_mean" "${kd}Salt mean" $2 $refoutp ; yy=$? ;;
0305 'Ssd') testoutput_var $1 "dynstat_${kd}salt_sd" "${kd}Salt Std.Dev" $2 $refoutp ; yy=$? ;;
0306 'Umn') testoutput_var $1 "dynstat_${kd}uvel_min" "${kd}U minimum" $2 $refoutp ; yy=$? ;;
0307 'Umx') testoutput_var $1 "dynstat_${kd}uvel_max" "${kd}U maximum" $2 $refoutp ; yy=$? ;;
0308 'Uav') testoutput_var $1 "dynstat_${kd}uvel_mean" "${kd}U mean" $2 $refoutp ; yy=$? ;;
0309 'Usd') testoutput_var $1 "dynstat_${kd}uvel_sd" "${kd}U Std.Dev" $2 $refoutp ; yy=$? ;;
0310 'Vmn') testoutput_var $1 "dynstat_${kd}vvel_min" "${kd}V minimum" $2 $refoutp ; yy=$? ;;
0311 'Vmx') testoutput_var $1 "dynstat_${kd}vvel_max" "${kd}V maximum" $2 $refoutp ; yy=$? ;;
0312 'Vav') testoutput_var $1 "dynstat_${kd}vvel_mean" "${kd}V mean" $2 $refoutp ; yy=$? ;;
0313 'Vsd') testoutput_var $1 "dynstat_${kd}vvel_sd" "${kd}V Std.Dev" $2 $refoutp ; yy=$? ;;
0314 'Etamn') testoutput_var $1 "dynstat_${kd}eta_min" "${kd}Eta minimum" $2 $refoutp ; yy=$? ;;
0315 'Etamx') testoutput_var $1 "dynstat_${kd}eta_max" "${kd}Eta maximum" $2 $refoutp ; yy=$? ;;
0316 'Etaav') testoutput_var $1 "dynstat_${kd}eta_mean" "${kd}Eta mean" $2 $refoutp ; yy=$? ;;
0317 'Etasd') testoutput_var $1 "dynstat_${kd}eta_sd" "${kd}Eta Std.Dev" $2 $refoutp ; yy=$? ;;
0318 'Qntmn') testoutput_var $1 "forcing_qnet_min" "Qnet minimum" $2 $refoutp ; yy=$? ;;
0319 'Qntmx') testoutput_var $1 "forcing_qnet_max" "Qnet maximum" $2 $refoutp ; yy=$? ;;
0320 'Qntav') testoutput_var $1 "forcing_qnet_mean" "Qnet mean" $2 $refoutp ; yy=$? ;;
0321 'Qntsd') testoutput_var $1 "forcing_qnet_sd" "Qnet Std.Dev" $2 $refoutp ; yy=$? ;;
0322 'aSImn') testoutput_var $1 "seaice_${kd}area_min" "SIce ${kd}Area min" $2 $refoutp ; yy=$? ;;
0323 'aSImx') testoutput_var $1 "seaice_${kd}area_max" "SIce ${kd}Area max" $2 $refoutp ; yy=$? ;;
0324 'aSIav') testoutput_var $1 "seaice_${kd}area_mean" "SIce ${kd}Area mean" $2 $refoutp ; yy=$? ;;
0325 'aSIsd') testoutput_var $1 "seaice_${kd}area_sd" "SIce ${kd}Area StDv" $2 $refoutp ; yy=$? ;;
0326 'hSImn') testoutput_var $1 "seaice_${kd}heff_min" "SIce ${kd}Heff min" $2 $refoutp ; yy=$? ;;
0327 'hSImx') testoutput_var $1 "seaice_${kd}heff_max" "SIce ${kd}Heff max" $2 $refoutp ; yy=$? ;;
0328 'hSIav') testoutput_var $1 "seaice_${kd}heff_mean" "SIce ${kd}Heff mean" $2 $refoutp ; yy=$? ;;
0329 'hSIsd') testoutput_var $1 "seaice_${kd}heff_sd" "SIce ${kd}Heff StDv" $2 $refoutp ; yy=$? ;;
0330 'uSImn') testoutput_var $1 "seaice_${kd}uice_min" "SIce ${kd}Uice min" $2 $refoutp ; yy=$? ;;
0331 'uSImx') testoutput_var $1 "seaice_${kd}uice_max" "SIce ${kd}Uice max" $2 $refoutp ; yy=$? ;;
0332 'uSIav') testoutput_var $1 "seaice_${kd}uice_mean" "SIce ${kd}Uice mean" $2 $refoutp ; yy=$? ;;
0333 'uSIsd') testoutput_var $1 "seaice_${kd}uice_sd" "SIce ${kd}Uice StDv" $2 $refoutp ; yy=$? ;;
0334 'vSImn') testoutput_var $1 "seaice_${kd}vice_min" "SIce ${kd}Vice min" $2 $refoutp ; yy=$? ;;
0335 'vSImx') testoutput_var $1 "seaice_${kd}vice_max" "SIce ${kd}Vice max" $2 $refoutp ; yy=$? ;;
0336 'vSIav') testoutput_var $1 "seaice_${kd}vice_mean" "SIce ${kd}Vice mean" $2 $refoutp ; yy=$? ;;
0337 'vSIsd') testoutput_var $1 "seaice_${kd}vice_sd" "SIce ${kd}Vice StDv" $2 $refoutp ; yy=$? ;;
6418c0ec62 Jean*0338 'AthSiG') testoutput_var $1 "thSI_Ice_Area_G" "thSIc Area Global" $2 $refoutp ; yy=$? ;;
0339 'AthSiS') testoutput_var $1 "thSI_Ice_Area_S" "thSIc Area South" $2 $refoutp ; yy=$? ;;
0340 'AthSiN') testoutput_var $1 "thSI_Ice_Area_N" "thSIc Area North" $2 $refoutp ; yy=$? ;;
0f2059bcae Jean*0341 'HthSiG') testoutput_var $1 "thSI_IceH_ave_G" "thSIc H Glob-ave" $2 $refoutp ; yy=$? ;;
0342 'HthSiS') testoutput_var $1 "thSI_IceH_ave_S" "thSIc H South-av" $2 $refoutp ; yy=$? ;;
0343 'HthSiN') testoutput_var $1 "thSI_IceH_ave_N" "thSIc H North-av" $2 $refoutp ; yy=$? ;;
0344 'HthMxS') testoutput_var $1 "thSI_IceH_max_S" "thSIc H South-max" $2 $refoutp ; yy=$? ;;
0345 'HthMxN') testoutput_var $1 "thSI_IceH_max_N" "thSIc H North-max" $2 $refoutp ; yy=$? ;;
ab6a12ddc5 Jean*0346 'sbo_M') testoutput_var $1 "sbo_mass" "SBO mass" $2 $refoutp ; yy=$? ;;
0347 'sboFW') testoutput_var $1 "sbo_mass_fw" "SBO m-FW" $2 $refoutp ; yy=$? ;;
0348 'sboAc') testoutput_var $1 "sbo_zoamc" "SBO AM-C" $2 $refoutp ; yy=$? ;;
0349 'sboAp') testoutput_var $1 "sbo_zoamp" "SBO AM-P" $2 $refoutp ; yy=$? ;;
bce14c7299 Jean*0350 'StrmIc') testoutput_var $1 "STREAMICE_FP_ERR" "StreamIce Solver" $2 $refoutp ; yy=$? ;;
6418c0ec62 Jean*0351 *) yy=99; echo "WARNING: asking for var=$xx : not recognized !" 1>&2 ;;
7ee8179b2a Jean*0352 esac
0353 else
0354 #- ptracers stats:
0355 nn=`echo $xx | sed 's/pt//' | sed 's/..$//'`
0356 ii=`echo $xx | sed 's/^pt[0-9]*//'`
0357 case $ii in
d81415648f Jean*0358 'mn') testoutput_var $1 "trcstat_${kd}ptracer0"$nn"_min" "${kd}pTr0"$nn"_min" $2 $refoutp ; yy=$? ;;
0359 'mx') testoutput_var $1 "trcstat_${kd}ptracer0"$nn"_max" "${kd}pTr0"$nn"_max" $2 $refoutp ; yy=$? ;;
0360 'av') testoutput_var $1 "trcstat_${kd}ptracer0"$nn"_mean" "${kd}pTr0"$nn"_mean" $2 $refoutp ; yy=$? ;;
0361 'sd') testoutput_var $1 "trcstat_${kd}ptracer0"$nn"_sd" "${kd}pTr0"$nn"_StDv" $2 $refoutp ; yy=$? ;;
7ee8179b2a Jean*0362 esac
0363 fi
6418c0ec62 Jean*0364 if test $xx = $sVar
0365 then allargs="$allargs > $yy <"
0366 else allargs="$allargs $yy"
0367 fi
0368 done
eb7e5e62ed Jean*0369
0370 nbVar=`echo $listVar | awk '{print NF}'`
6418c0ec62 Jean*0371 if [ $nbVar -lt $LEN_CHECK_LIST ] ; then
0372 #-- fill line (up to standard length) with dot:
0373 adNul=`expr $LEN_CHECK_LIST - $nbVar | awk '{for(i=1;i<=$1;i++){print "."}}'`
eb7e5e62ed Jean*0374 echo $allargs $adNul
6418c0ec62 Jean*0375 else
eb7e5e62ed Jean*0376 echo $allargs
9750e41317 Jean*0377 fi
456c314cce Jean*0378 # <-- same processing for adjoint & forward test
2ff82eb834 Ed H*0379 }
0380
0381 genmakemodel()
0382 {
0383 # genmakemodel directory
6d54cf9ca1 Ed H*0384 if test "x$NOGENMAKE" = xt ; then
0385 echo "genmake skipped!"
0386 else
e53112a6cf Ed H*0387 if test "x$BASH" = x ; then
0388 GENMAKE2="../../../tools/genmake2"
0389 else
0390 GENMAKE2="$BASH ../../../tools/genmake2 -bash $BASH"
0391 fi
6d54cf9ca1 Ed H*0392 (
0393 cd $1;
4619920a5f Ed H*0394 command="$GENMAKE2 -ds -m $MAKE"
ca2316a28b Jean*0395 if test "x$MKDEPEND" != x ; then
0396 command="$command -makedepend=$MKDEPEND"
0397 fi
b4daa24319 Shre*0398 if test $KIND = 6 ; then
b63206be5d Jean*0399 command="$command -oad -mods=../$code_dir"
b4daa24319 Shre*0400 elif [ $KIND -ge 3 ] ; then
0401 command="$command -tap -mods=../$code_dir"
3907106aba Jean*0402 else
b63206be5d Jean*0403 command="$command -mods=../$code_dir"
4619920a5f Ed H*0404 fi
6d54cf9ca1 Ed H*0405 if test "x$OPTFILE" != xNONE ; then
a7c0a887cd Jean*0406 command="$command -optfile=$OPTFILE"
2ff82eb834 Ed H*0407 fi
5a67953813 Jean*0408 if test $OptLev = 1 ; then
6418c0ec62 Jean*0409 command="$command -ieee"
0410 fi
5a67953813 Jean*0411 if test $OptLev = 0 ; then
0412 command="$command -devel"
6d54cf9ca1 Ed H*0413 fi
232027f18d Jean*0414 if test "x$GSL" = xt ; then
0415 command="$command -gsl"
0416 fi
d9ae4e2b34 Jean*0417 if test "x$MPI" != x0 ; then
152b247de4 Ed H*0418 command="$command -mpi"
0419 fi
616bf911ff Jean*0420 if test "x$MULTI_THREAD" = xt ; then
0421 #- run multi-threaded using OpenMP:
0422 command="$command -omp"
0423 fi
9750e41317 Jean*0424 if test "x$USE_R4" = xt ; then
0425 command="$command -use_r4"
0426 fi
1f09e8610e Jean*0427 if test "x$EXTRFLG" != x ; then
0428 command="$command -extra_flag $EXTRFLG"
0429 fi
72af1157c6 Jean*0430 if test "x$NOCATAD" = xt ; then
0431 command="$command -nocat4ad"
0432 fi
a986ef8661 Cons*0433 if test "x$TS" = xt ; then
0434 command="$command -ts"
0435 fi
0436 if test "x$PAPIS" = xt ; then
0437 command="$command -papis"
9750e41317 Jean*0438 else
a986ef8661 Cons*0439 if test "x$PCLS" = xt ; then
0440 command="$command -pcls"
0441 fi
9d0c386f0c dngo*0442 if test "x$OADSINGULARITY" != x ; then
0443 command="$command -oadsingularity \"$OADSINGULARITY\""
0444 fi
a986ef8661 Cons*0445 fi
6fcdccb64d Jean*0446 printf 'genmake ... '
0093035fc0 Jean*0447 eval $command > genmake.tr_log 2>&1
6d54cf9ca1 Ed H*0448 RETVAL=$?
59e7e2f70f Ed H*0449 # Reduce the size of the testing emails!
33ebd8ef34 Ed H*0450 head -100 Makefile > $CDIR/Makefile_head
6d54cf9ca1 Ed H*0451 if test "x$RETVAL" != x0 ; then
0093035fc0 Jean*0452 tail genmake.tr_log
6fcdccb64d Jean*0453 echo "genmakemodel: genmake failed"
4cc2b2ecef Jean*0454 cp genmake.log genmake_* genmake.tr_log $CDIR
6d54cf9ca1 Ed H*0455 return 1
0456 else
6fcdccb64d Jean*0457 echo "successful"
6d54cf9ca1 Ed H*0458 fi
0459 )
0460 fi
2ff82eb834 Ed H*0461 }
0462
0463 makeclean()
0464 {
0465 # makeclean directory
d5ed8695dd Jean*0466 if test "x$NOGENMAKE" = xf ; then rm -f $1/make.tr_log ; fi
6d54cf9ca1 Ed H*0467 if test "x$NOCLEAN" = xt ; then
0e6cc40375 Jean*0468 echo "make Clean skipped!"
6d54cf9ca1 Ed H*0469 else
0470 (
0471 cd $1;
84370bfea3 Jean*0472 #if test -e $OUTPUTFILE ; then rm -f $OUTPUTFILE ; fi
6d54cf9ca1 Ed H*0473 if test -r Makefile ; then
6fcdccb64d Jean*0474 printf 'clean build-dir: make Clean ... '
0093035fc0 Jean*0475 $MAKE Clean >> make.tr_log 2>&1
6d54cf9ca1 Ed H*0476 RETVAL=$?
0477 if test "x$RETVAL" != x0 ; then
0093035fc0 Jean*0478 tail make.tr_log
6fcdccb64d Jean*0479 echo "makeclean: \"make Clean\" failed"
4cc2b2ecef Jean*0480 cp make.tr_log genmake.log genmake.tr_log $CDIR
6d54cf9ca1 Ed H*0481 return 1
0482 fi
6fcdccb64d Jean*0483 echo successful
642fbd44e7 Jean*0484 else
0485 echo ''
6d54cf9ca1 Ed H*0486 fi
0487 exit 0
0488 )
0489 fi
2ff82eb834 Ed H*0490 }
0491
0e6cc40375 Jean*0492 run_clean()
0b035b108c Ed H*0493 {
0e6cc40375 Jean*0494 # run_clean directory
0495 if test "x$NOCLEAN" = xt ; then
0496 echo "run_clean skipped!"
0497 else
e6f2a663b8 Jean*0498 (
0499 cd $1;
0500 printf 'clean run-dir ... '
0501 # part of what is done after "make clean" when doing "make CLEAN"
0502 find . -name "*.meta" -exec rm {} \;
0503 find . -name "*.data" -exec rm {} \;
deacece587 Oliv*0504 find . -name "*.tmp" -exec rm {} \;
e6f2a663b8 Jean*0505 find . -name "fort.*" -exec rm {} \;
0506 find . -type l -exec rm {} \;
0507 #- should remove executable only if sym-link (already done above)
0508 rm -f $RUNLOG *.txt STDOUT.* STDERR.* *diagnostics.log *.[0-9][0-9][0-9][0-9].log
0509 rm -f datetime costfinal divided.ctrl snapshot* output_adm.*.diva_*
0510 rm -f *_MIT_CE_000.opt0000 costfunction*0000
5542b50cd2 Jean*0511 rm -f oad_cp.[0-9][0-9][0-9].?????
e6f2a663b8 Jean*0512 rm -rf mnc_test_*
0513 echo successful
0514 exit 0
0515 )
0b035b108c Ed H*0516 fi
0517 }
0518
2ff82eb834 Ed H*0519 makedependmodel()
0520 {
0521 # makedependmodel directory
6d54cf9ca1 Ed H*0522 if test "x$NODEPEND" = xt ; then
0523 echo "make depend skipped!"
0524 else
0525 (
0526 cd $1;
6fcdccb64d Jean*0527 printf 'make depend ... '
0093035fc0 Jean*0528 $MAKE depend >> make.tr_log 2>&1
6d54cf9ca1 Ed H*0529 RETVAL=$?
0530 if test "x$RETVAL" != x0 ; then
0093035fc0 Jean*0531 tail make.tr_log
6fcdccb64d Jean*0532 echo "makedependmodel: make depend failed"
4cc2b2ecef Jean*0533 cp make.tr_log genmake.log genmake.tr_log $CDIR
6d54cf9ca1 Ed H*0534 return 1
0535 else
6fcdccb64d Jean*0536 echo successful
6d54cf9ca1 Ed H*0537 fi
0538 )
0539 fi
2ff82eb834 Ed H*0540 }
0541
0542 makemodel()
0543 {
0544 # makemodel directory
0545 (
f459d64861 Jean*0546 mk_fail=0
416e70d1a2 Jean*0547 if test "x$NOMAKE" = xt ; then
0548 cd $1;
0549 if test -x $EXECUTABLE ; then
0550 echo "make skipped!"
0551 else
0552 echo "no executable!"
f459d64861 Jean*0553 mk_fail=3
416e70d1a2 Jean*0554 fi
0555 else
2ff82eb834 Ed H*0556 cd $1;
0557 if test -r Makefile ; then
e977410d1b Mart*0558 if test "x$MKSMALLF" = xt ; then
0559 printf 'make small_f ... '
0560 $MAKE_CMD small_f >> make.tr_log 2>&1
0561 RETVAL=$?
0562 if test "x$RETVAL" != x0 ; then
0563 tail make.tr_log
0564 echo failed
0565 cp genmake.log genmake.tr_log $CDIR
0566 tail -$NBLINES_MKLOG make.tr_log > $CDIR"/make.tr_log_tail"
0567 rm -f $EXECUTABLE
0568 mk_fail=1
0569 else
0570 echo successful
0571 fi
0572 fi
cc019522d9 Jean*0573 printf "make $TARG ... "
72af1157c6 Jean*0574 $MAKE_CMD $TARG >> make.tr_log 2>&1
2ff82eb834 Ed H*0575 RETVAL=$?
0576 if test "x$RETVAL" != x0 ; then
0093035fc0 Jean*0577 tail make.tr_log
6fcdccb64d Jean*0578 echo failed
da8170bd49 Jean*0579 cp genmake.log genmake.tr_log $CDIR
0580 tail -$NBLINES_MKLOG make.tr_log > $CDIR"/make.tr_log_tail"
e49dac07a6 Jean*0581 rm -f $EXECUTABLE
f459d64861 Jean*0582 mk_fail=1
2ff82eb834 Ed H*0583 else
6fcdccb64d Jean*0584 echo successful
2ff82eb834 Ed H*0585 fi
f459d64861 Jean*0586 else
0587 echo "no Makefile !"
0588 mk_fail=2
2ff82eb834 Ed H*0589 fi
416e70d1a2 Jean*0590 fi
1fff053a17 Jean*0591 if test $KIND = 1 -a -f taf_ftl.log ; then
3513440a2a Jean*0592 grep 'Processing files at' make.tr_log | tail -1 >> $CDIR"/summary.txt"
f561fdaba7 Jean*0593 head -1 taf_ftl.log >> $CDIR"/summary.txt"
1fff053a17 Jean*0594 fi
6418c0ec62 Jean*0595 if test $KIND = 2 -a -f taf_ad.log ; then
3513440a2a Jean*0596 grep 'Processing files at' make.tr_log | tail -1 >> $CDIR"/summary.txt"
f561fdaba7 Jean*0597 head -1 taf_ad.log >> $CDIR"/summary.txt"
0598 nerr=`grep -c 'TAF *.* ERROR ' taf_ad.log`
9243e50d1e Jean*0599 nwar=`grep -c '^TAF *.* RECOMPUTATION *.* WARNING ' taf_ad.log`
f561fdaba7 Jean*0600 if test -f taf_output ; then
0601 n2er=`grep -c 'TAF *.* ERROR ' taf_output`
d758744a4f Jean*0602 n3er=`grep -c '\*ERROR\* ' taf_output`
0603 nerr=`expr $nerr + $n2er + $n3er`
f561fdaba7 Jean*0604 fi
0605 echo " TAF reports $nerr Errors and $nwar Recomputation Warnings" \
360fa2f691 Jean*0606 >> $CDIR"/summary.txt"
8908c6917c Jean*0607 #- report number of calls for some key S/R, i.e.,
0608 # load_fields_driver, do_oceanic_phys, and seaice_model
0609 # Multiple calls indicate hidden but expensive recomputations
0610 FS='f'
0611 if test -f genmake_state ; then eval `grep '^FS=' genmake_state` ; fi
0612 if test "x$NOCATAD" = xt ; then
0613 adfiles="*_ad.$FS"
49a029e3de Mart*0614 else
8908c6917c Jean*0615 adfiles=ad_taf_output.$FS
49a029e3de Mart*0616 fi
8908c6917c Jean*0617 nbf=`ls $adfiles 2> /dev/null | wc -l`
0618 if [ $nbf -eq 0 ] ; then
0619 echo "WARNING: no adfiles '$adfiles' found" >> $CDIR"/summary.txt"
0620 nlfd=0 ; ndop=0 ; nsm=0
0621 else
0622 nlfd=`grep "call load_fields_driver(" ${adfiles} | wc -l`
0623 nlfdmd=`grep "call load_fields_drivermd(" ${adfiles} | wc -l`
0624 nlfd=$((nlfd+nlfdmd-1))
0625 ndop=`grep "call do_oceanic_phys(" ${adfiles} | wc -l`
0626 nsm=`grep "call seaice_model(" ${adfiles} | wc -l`
49a029e3de Mart*0627 fi
d37c4896c1 Mart*0628 echo " load_fields_driver, do_oceanic_phys, seaice_model are called " \
0629 "( $nlfd , $ndop , $nsm ) time(s)" >> $CDIR"/summary.txt"
360fa2f691 Jean*0630 fi
b4daa24319 Shre*0631 if test -f make.tr_log && test $KIND = 4 -o $KIND = 5 ; then
0632 grep '^Tapenade ' make.tr_log | tail -n 1 >> $CDIR"/summary.txt"
0633 fi
f459d64861 Jean*0634 if test $mk_fail != 0 ; then return $mk_fail ; fi
2ff82eb834 Ed H*0635 )
0636 }
0637
d9ae4e2b34 Jean*0638 mk_mpi_size()
0639 {
6c95586363 Jean*0640 # mk_mpi_size input_file output_file proc_Nb threads_Nb_X threads_Nb_Y
d9ae4e2b34 Jean*0641 #
6c95586363 Jean*0642 # make new SIZE.h (=output_file) from SIZE.h_mpi (=input_file)
d9ae4e2b34 Jean*0643 # for an MPI build with no more than proc_Nb processors ;
6c95586363 Jean*0644 # ensure that enough tiles per proc (nSx,nSy) remain for the given
0645 # number of threads (nTx,nTy) ;
0646 # return the effective number of processors.
d9ae4e2b34 Jean*0647
0648 inp=$1
0649 out=$2
0650 np=$3
6c95586363 Jean*0651 tx=$4
0652 ty=$5
d9ae4e2b34 Jean*0653 tmp=TTT.$$
0654
6c95586363 Jean*0655 # dirX : select with direction to favor in MPI process repartition
0656 # dirX=1 : prefer to put more proc in X direction
0657 # dirX=0 : prefer to put more proc in Y direction
0658 dirX=0
0659
d9ae4e2b34 Jean*0660 px=`grep "^ & *nPx *=" $inp | sed "s/^ & *nPx *= *//" | sed 's/, *$//'`
0661 py=`grep "^ & *nPy *=" $inp | sed "s/^ & *nPy *= *//" | sed 's/, *$//'`
0662 sx=`grep "^ & *nSx *=" $inp | sed "s/^ & *nSx *= *//" | sed 's/, *$//'`
0663 sy=`grep "^ & *nSy *=" $inp | sed "s/^ & *nSy *= *//" | sed 's/, *$//'`
0664
6c95586363 Jean*0665 #- for each direction, assume # of threads is a multiple of total number of tiles
0666 nx=$px
0667 if [ `expr $sx % $tx` -ne 0 -a `expr $sx \* $px % $tx` -eq 0 ] ; then
0668 nx=`expr $sx \* $px / $tx`
0669 if [ $verbose -gt 1 ]; then
0670 echo " change px from $px to $nx to accommodate $tx threads"
0671 fi
0672 fi
0673 ny=$py
0674 if [ `expr $sy % $ty` -ne 0 -a `expr $sy \* $py % $ty` -eq 0 ] ; then
0675 ny=`expr $sy \* $py / $ty`
0676 if [ $verbose -gt 1 ]; then
0677 echo " change py from $py to $ny to accommodate $ty threads"
0678 fi
0679 fi
d9ae4e2b34 Jean*0680 #- find the largest divisor of input_file proc Nb, but not larger than $np
0681 pp=0
2f7af142fa Jean*0682 i=1
6c95586363 Jean*0683 while [ $i -le $nx ] ; do
0684 if [ `expr $nx % $i` -eq 0 ] ; then
2f7af142fa Jean*0685 j=1
6c95586363 Jean*0686 while [ $j -le $ny ] ; do
0687 if [ `expr $ny % $j` -eq 0 ] ; then
2f7af142fa Jean*0688 ij=`expr $i \* $j`
0689 if [ $ij -gt $pp ] ; then
7ba778f1ca Jean*0690 flag=1
0691 elif [ $ij -eq $pp ] ; then
0692 flag=$dirX
0693 else
0694 flag=0
0695 fi
0696 if test $flag = 1 ; then
2f7af142fa Jean*0697 if [ $ij -le $np ] ; then
0698 ix=$i ; jy=$j ; pp=$ij
0699 #echo " ix,jy= $ix,$jy"
0700 fi
0701 fi
0702 fi
0703 j=`expr $j + 1`
0704 done
d9ae4e2b34 Jean*0705 fi
2f7af142fa Jean*0706 i=`expr $i + 1`
d9ae4e2b34 Jean*0707 done
0708
0709 #- create new SIZE.h type file:
0710 sx=`expr $sx \* $px / $ix`
0711 sy=`expr $sy \* $py / $jy`
0712 if [ $verbose -gt 1 ]; then
0713 echo " px,py,np= $px,$py,$np : New MPI size: px,py= $ix,$jy : sx,sy= $sx,$sy"
0714 fi
0715 sed "/^ \& *nPx *=/s/[0-9]*,/$ix,/" $inp > $tmp
0716 sed "/^ \& *nPy *=/s/[0-9]*,/$jy,/" $tmp > $out
0717 sed "/^ \& *nSx *=/s/[0-9]*,/$sx,/" $out > $tmp
0718 sed "/^ \& *nSy *=/s/[0-9]*,/$sy,/" $tmp > $out
0719 rm -f $tmp
0720 return $pp
0721 }
0722
e61115937c Ed H*0723 symlink_mpifiles()
0724 {
0725 # Put special links so that MPI specific files are used
0726 # This MUST be invoked between makeclean and makelinks because
0727 # the Makefile will link to non-mpi files by default
0728
0729 dir=$1
0730 code_dir=$2
d9ae4e2b34 Jean*0731 build_dir=$dir/$3
9750e41317 Jean*0732
e61115937c Ed H*0733 # These are files that should replace their counter-part when using -mpi
d9ae4e2b34 Jean*0734 MPI_FILES=`(cd $dir/$code_dir; find . -name "*_mpi" -print)`
0735
0736 for ii in $MPI_FILES ; do
0737 i=`echo $ii | sed 's:^\./::'`
0738 name=`echo $i | sed 's:_mpi::'`
0739 file="../$code_dir/$i"
0740 if test $name = 'SIZE.h' ; then file="SIZE.h.mpi" ; fi
0741
0742 # Is this an MPI run?
0743 if test "x$MPI" = x0 ; then
0744 # NO: We undo any _mpi symbolically linked files
0745 if test -L $build_dir/$name ; then
0746 ( cd $build_dir ; cmp $name $file > /dev/null 2>&1 )
3007f9fbc4 Ed H*0747 RETVAL=$?
0748 if test "x$RETVAL" = x0 ; then
d9ae4e2b34 Jean*0749 if [ $verbose -gt 1 ]; then
0750 echo " Un-linking $name from ../$code_dir" ; fi
0751 rm -f $build_dir/$name
e61115937c Ed H*0752 fi
0753 fi
d9ae4e2b34 Jean*0754 else
0755 # YES: We symbolically link these files to the build
0756 # dir so long as there is no real file in place
0757 ( cd $build_dir ; cmp $name $file > /dev/null 2>&1 )
0758 RETVAL=$?
0759 if [ $verbose -gt 1 ]; then echo " cmp $name $file returns: $RETVAL" ; fi
0760 if test "x$RETVAL" != x0 ; then
0761 if test -h $build_dir/$name ; then rm -f $build_dir/$name ; fi
0762 if test ! -r $build_dir/$name ; then
0763 if [ $verbose -gt 1 ]; then echo " Linking $name to $file" ; fi
0764 (cd $build_dir; ln -sf $file $name)
0765 fi
0766 fi
0767 fi
0768 done
e61115937c Ed H*0769 }
0770
2ff82eb834 Ed H*0771 linkdata()
0772 {
0e6cc40375 Jean*0773 # linkdata run_dir input_dir_1 input_dir_2 ...
2ff82eb834 Ed H*0774 #
0775 # symbolically link data files to run directory
0e6cc40375 Jean*0776 if test -d $1 ; then
474019363f Ed H*0777 (
0e6cc40375 Jean*0778 cd $1 ; shift
6fcdccb64d Jean*0779 echo 'linkdata from dirs:' $*
6418c0ec62 Jean*0780 inpMPI=`(cd ../$1 ; find . -name "*.mpi" -print | sed 's:^\./::')`
8bd4a294c2 Jean*0781 for xx in $inpMPI ; do
0782 if test -r "../"$1"/"$xx ; then
15ec4b1e94 Jean*0783 # found 1 .mpi sfx file in 1rst input dir and it is readable
8bd4a294c2 Jean*0784 yy=`echo $xx | sed 's:\.mpi$::'`
d9ae4e2b34 Jean*0785 if test "x$MPI" = "x0" ; then
0786 # not mpi test: remove symbolic link
0787 if test -h $yy ; then rm -f $yy ; fi
0788 else
0789 # mpi test: remove symbolic link & link .mpi sfx file
8bd4a294c2 Jean*0790 if test -h $yy ; then rm -f $yy ; fi
9750e41317 Jean*0791 if test ! -r $yy ; then
8bd4a294c2 Jean*0792 ln -sf "../"$1"/"$xx $yy ;
6fcdccb64d Jean*0793 printf " $xx" 1>&2
8bd4a294c2 Jean*0794 fi
0795 fi
0796 fi
0797 done
0e6cc40375 Jean*0798 if test -r "../"$1"/eedata.mth" ; then
0799 # found eedata.mth in 1rst input dir and it is readable
0800 if test "x$MULTI_THREAD" = "xt" ; then
0801 # multi-threaded test: remove symbolic link & link eedata.mth
0802 if test -h eedata ; then rm -f eedata ; fi
9750e41317 Jean*0803 if test ! -r eedata ; then
0e6cc40375 Jean*0804 ln -sf "../"$1"/eedata.mth" eedata ;
6fcdccb64d Jean*0805 printf ' eedata.mth' 1>&2
4619920a5f Ed H*0806 fi
0e6cc40375 Jean*0807 else
0808 # not multi-threaded test: remove eedata symbolic link
0809 if test -h eedata ; then rm -f eedata ; fi
23874084ad Jean*0810 fi
4619920a5f Ed H*0811 fi
878c588496 Jean*0812 prevDir='NONE'
0e6cc40375 Jean*0813 for ldir in $* ; do
878c588496 Jean*0814 if test -d "../"$ldir -a $ldir != $prevDir ; then
6418c0ec62 Jean*0815 printf " ldir=${ldir}:" 1>&2
0e6cc40375 Jean*0816 files=`( cd "../"$ldir ; ls -1 | grep -v CVS )`
0817 for i in $files ; do
0818 if test ! -d "../"$ldir/$i ; then
0819 if test ! -r $i ; then
0820 printf ' '$i 1>&2
0821 ln -sf "../"$ldir"/"$i $i
0822 fi
0823 fi
0824 done
15ec4b1e94 Jean*0825 printf ' ;\n' 1>&2
0e6cc40375 Jean*0826 fi
878c588496 Jean*0827 prevDir=$ldir
0e6cc40375 Jean*0828 done
15ec4b1e94 Jean*0829 if test -x prepare_run ; then
0830 ./prepare_run 1>&2
0831 fi
474019363f Ed H*0832 )
2ff82eb834 Ed H*0833 fi
0834 }
0835
0836 runmodel()
0837 {
96d85cca71 Ed H*0838 # runmodel directory
2ff82eb834 Ed H*0839 #
d9ae4e2b34 Jean*0840 # runs $COMMAND in "directory"
96d85cca71 Ed H*0841 # (where "$COMMAND" is relative to "directory")
2ff82eb834 Ed H*0842 (
0843 cd $1
6fcdccb64d Jean*0844 printf 'runmodel in %s ... ' $1
360fa2f691 Jean*0845 if test "x$MPI" != x0 ; then
0846 #- adjust the MPI run command with the right number of Procs
0847 #echo '' ; echo " COMMAND='$COMMAND'"
250e8a7757 Jean*0848 COMMAND=`echo $COMMAND | sed "s/ TR_NPROC/ $LOC_NPROC/"`
360fa2f691 Jean*0849 if test "x$MPI_MFILE" != x ; then
2856d356e3 Jean*0850 COMMAND=`echo $COMMAND | sed "s/ TR_MFILE / ..\/$LOC_MFILE /"`
360fa2f691 Jean*0851 fi
0852 #echo " COMMAND='$COMMAND'"
0853 fi
28b546244a Jean*0854 if test -L $EXECUTABLE ; then
0855 if test -x "../"$builddir"/"$EXECUTABLE ; then
d9ae4e2b34 Jean*0856 cmp $EXECUTABLE "../"$builddir"/"$EXECUTABLE > /dev/null 2>&1
0857 outD=$? ; if test "x$outD" != x0 ; then rm -f $EXECUTABLE ; fi
28b546244a Jean*0858 else rm -f $EXECUTABLE
0859 fi
7e8ef1f316 Jean*0860 fi
6418c0ec62 Jean*0861 if test ! -x $EXECUTABLE -a -x "../"$builddir"/"$EXECUTABLE ; then
baf6258c8a Jean*0862 echo " link" $EXECUTABLE "from dir ../"$builddir > run.log_tmp
0e6cc40375 Jean*0863 ln -sf "../"$builddir"/"$EXECUTABLE .
0864 fi
6418c0ec62 Jean*0865 if test ! -x $EXECUTABLE ; then
bbea11a65d Jean*0866 rm -f $RUNLOG ; touch $RUNLOG
0867 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
0868 echo " no executable:" $EXECUTABLE >> $RUNLOG
0869 RETVAL=8
0870 ENDVAL=-1
2b043763fc Jean*0871 else
6418c0ec62 Jean*0872 if test ! -f $OUTPUTFILE -o $OUTPUTFILE -ot $EXECUTABLE ; then
0873 # output do not exist or is older than executable:
840f5814ba Jean*0874 rm -f $OUTPUTFILE $RUNLOG ; touch $RUNLOG
bbea11a65d Jean*0875 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
ba205b1a1d Jean*0876 #- Divided Adjoint Run:
0baeafc4ac Jean*0877 add_DIVA_runs=0
ba205b1a1d Jean*0878 # get the number of additional runs (add_DIVA_runs) from file "run_ADM_DIVA"
0879 if test $KIND = 2 -a -f run_ADM_DIVA ; then
aad71d9e67 Mart*0880 adm_diva_nb=`sed -n '/^ *add_DIVA_runs *=/p' run_ADM_DIVA | sed 's/ //g'`
ba205b1a1d Jean*0881 echo " Divided Adjoint Run: $adm_diva_nb" >> $RUNLOG
0882 eval "let $adm_diva_nb"
0883 if [ $add_DIVA_runs -ge 1 ] ; then
3a516654c6 Jean*0884 extraRuns=`expr $add_DIVA_runs - 1`
ba205b1a1d Jean*0885 rm -f costf* divided.ctrl snapshot*
0886 echo -n "(add_DIVA_runs=$add_DIVA_runs) ... "
3a516654c6 Jean*0887 for ii in `seq 0 $extraRuns` ; do
ba205b1a1d Jean*0888 ( eval $COMMAND ) >> $RUNLOG 2>&1
0889 echo " additional DIVA run # $ii : done" >> $RUNLOG
0890 mv -f $OUTPUTFILE ${OUTPUTFILE}.diva_${ii}
0891 done
0892 fi
ebcc29af97 Jean*0893 elif test -f run_ADM_DIVA ; then
0894 rm -f costf* divided.ctrl snapshot*
ba205b1a1d Jean*0895 fi
0896 #- special DIVA processing ends here
bbea11a65d Jean*0897 ( eval $COMMAND ) >> $RUNLOG 2>&1
0898 RETVAL=$?
0899 ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'`
0900 if [ $POSTCLEAN -eq 1 -a $ENDVAL -gt 0 ] ; then
0901 find . -name "*.meta" -exec rm {} \;
0902 find . -name "*.data" -exec rm {} \;
0903 rm -rf mnc_test_*
0e6cc40375 Jean*0904 fi
bbea11a65d Jean*0905 else
0906 RETVAL=0
871a0c28c5 Jean*0907 ENDVAL=`tail $OUTPUTFILE | grep -c 'PROGRAM MAIN: Execution ended Normally'`
bbea11a65d Jean*0908 touch $RUNLOG
0909 if test -f run.log_tmp ; then cat run.log_tmp >> $RUNLOG ; fi
15ec4b1e94 Jean*0910 echo "---------->> $OUTPUTFILE is up to date" >> $RUNLOG 2>&1
bbea11a65d Jean*0911 fi
2b043763fc Jean*0912 fi
baf6258c8a Jean*0913 rm -f run.log_tmp
1fff053a17 Jean*0914 #- in all cases where OutputFile exists, report SIZE and time
360fa2f691 Jean*0915 if test -f $OUTPUTFILE ; then
0916 grep '(PID\.TID 0000\.0001) n.. =' $OUTPUTFILE \
1fff053a17 Jean*0917 | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt"
deb0ad3aea Mart*0918 # grep -A3 'Seconds in section "ALL' $OUTPUTFILE \
0919 # | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt"
0920 # some implementations of grep cannot do contextual searches so we
0921 # replace the above with a sed command
0922 cat $OUTPUTFILE | sed -n '/Seconds in section "ALL/{N
0923 N
0924 N
0925 p
0926 }' | sed 's/(PID.TID 0000.0001) //' >> $CDIR"/summary.txt"
360fa2f691 Jean*0927 fi
0928 if test -s STDERR.0000 ; then cp STDERR.0000 $CDIR"/STDERR.0000" ; fi
3f26a348bd Jean*0929 if [ $RETVAL -eq 0 -a $ENDVAL -gt 0 ] ; then
6fcdccb64d Jean*0930 echo successful
0931 printf '=> output from running in %s :\n' $1 1>&2
0932 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
96d85cca71 Ed H*0933 return 0
3cf8d39958 Jean*0934 elif [ $RETVAL -ne 0 -a $ENDVAL -gt 0 ] ; then
0935 #-- for some weird cases (run is finihed but with error code)
6fcdccb64d Jean*0936 echo 'finished with error (run:' $RETVAL ' end:' $ENDVAL ')'
0937 printf '=> output from running in %s :\n' $1 1>&2
0938 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
3cf8d39958 Jean*0939 return 0
96d85cca71 Ed H*0940 else
6fcdccb64d Jean*0941 echo 'failed (run:' $RETVAL ' end:' $ENDVAL ')'
0942 printf '=> output from running in %s :\n' $1 1>&2
0943 tail $RUNLOG | sed 's/^.*/> &/g' 1>&2
baf6258c8a Jean*0944 cp $RUNLOG $CDIR"/"$RUNLOG
96d85cca71 Ed H*0945 return 1
2ff82eb834 Ed H*0946 fi
0947 )
0948 }
0949
0950 createcodelet()
0951 {
0952 # create codelet for comparing model output
0953
63e0800ef7 Jean*0954 printf "creating the comparison code (using CC=$CC)... "
2366f571a5 Jean*0955 cat > tr_cmpnum.c <<EOF
cfc62862f0 Ed H*0956 #include <stdio.h>
0957 #include <math.h>
0958 int main( int argc, char** argv ) {
2366f571a5 Jean*0959 int linnum,cmplin,best,lncnt;
2adbdc8a5e Ed H*0960 double a,b,abave,relerr;
8d90f27f15 Jean*0961 best = -22;
852a4acb3d Alis*0962 lncnt = 0;
3ff2fe3646 Jean*0963 while( 1 & ( (lncnt+=1) < 999 ) ) {
cfc62862f0 Ed H*0964 scanf("%d", &linnum);
0965 if (linnum == -1) break;
0966 scanf("%lf", &a); scanf("%lf", &b);
2adbdc8a5e Ed H*0967 abave = 0.5*(fabs(a)+fabs(b));
2366f571a5 Jean*0968 if ( abave == abave ) {
0969 if (abave > 0.0) {
0970 relerr=fabs(a-b)/abave;
0971 if (relerr > 0.0) { cmplin = (int)rint(log10(relerr)); }
0972 else { cmplin = -16 ; }
0973 best = (best > cmplin) ? best : cmplin; }
0974 else { cmplin = -22 ; }
0975 /* printf("%d ; %lf ; %lf\n",cmplin,a,b); */
0976 }
0977 else {
0978 /* printf("%lf ; %lf ; %lf\n",abave,a,b); */
0979 break; }
cfc62862f0 Ed H*0980 }
852a4acb3d Alis*0981 if (lncnt == 999) best=-29;
2366f571a5 Jean*0982 if (linnum != -1) best=-99;
cfc62862f0 Ed H*0983 printf("%d\n", -best);
0984 return 0;
0985 }
0986 EOF
2366f571a5 Jean*0987 $CC -o tr_cmpnum tr_cmpnum.c -lm
cfc62862f0 Ed H*0988
2366f571a5 Jean*0989 if [ -x ./tr_cmpnum ]; then
2ff82eb834 Ed H*0990 echo "OK"
0991 return 0
0992 else
0993 echo
9750e41317 Jean*0994 echo "ERROR: failed to compile comparison code -- please specify"
a581267379 Ed H*0995 echo " a C compiler using the CC environment variable."
2ff82eb834 Ed H*0996 exit 1
0997 fi
0998 }
0999
1000 formatresults()
1001 {
1002 # formatresults expt genmake depend make run results*
1003
1004 nm=$1
1005 printf '%s %s %s %s' $2 $3 $4 $5
1006 shift; shift; shift; shift; shift;
eb7e5e62ed Jean*1007 listPrt=$@
1008 listRes=`echo $listPrt | sed 's/>//' | sed 's/<//'`
1009 xx=`echo $listPrt | sed 's/.*>//' | sed 's/<.*//' | awk '{print $1}'`
4d91a93b49 Jean*1010 printf '%3s' $listPrt
44a2688a94 Jean*1011 # line below does not work on hp-ux_ia64 : do those substitutions later on
6ce7c44299 Jean*1012 # printf '%3s' $listPrt | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</'
9750e41317 Jean*1013
eb7e5e62ed Jean*1014 if [ $xx = '..' ]; then
1015 printf ' N/O '
1016 elif [ $xx = '--' ]; then
1017 printf ' N/O '
1018 elif [ $xx = 99 ]; then
2ff82eb834 Ed H*1019 printf ' N/O '
1020 else
eb7e5e62ed Jean*1021 if [ $xx -ge $MATCH_CRIT ]; then
2ff82eb834 Ed H*1022 printf ' pass'
1023 else
1024 printf ' FAIL'
1025 fi
1026 fi
1027 printf ' %s' $nm
f561fdaba7 Jean*1028 if test $KIND = 2 ; then
49a029e3de Mart*1029 #-- append taf report summary:
f561fdaba7 Jean*1030 tafrep=`grep -c '^ TAF reports ' $CDIR/summary.txt`
1031 if test $tafrep = 1 ; then
49a029e3de Mart*1032 grep '^ TAF reports ' $CDIR/summary.txt | awk '{printf " (e=%i, w=%i,",$3,$6}'
1033 grep '^ load_fields_driver,' $CDIR/summary.txt \
d37c4896c1 Mart*1034 | awk '{printf " lfd=%i, dop=%i, sm=%i)",$7,$9,$11}'
f561fdaba7 Jean*1035 fi
1036 fi
2ff82eb834 Ed H*1037 printf '\n'
9750e41317 Jean*1038
2ff82eb834 Ed H*1039 }
1040
1041 scandirs()
1042 {
b2fb7c7569 Jean*1043 if [ $# -eq 1 ]; then
1044 for arg in * ; do
6418c0ec62 Jean*1045 #test -f $arg/$1 && echo $arg
1046 test -f $arg/$1 -o -f $arg/$1.gz && echo $arg
b2fb7c7569 Jean*1047 done
2ff82eb834 Ed H*1048 else
b2fb7c7569 Jean*1049 echo $*
2ff82eb834 Ed H*1050 fi
1051 }
1052
0179fa2c74 Jean*1053 check_eedata()
1054 {
7ba778f1ca Jean*1055 # check_eedata eedata size.h
0179fa2c74 Jean*1056 if [ $# -eq 2 ] ; then
7ba778f1ca Jean*1057 if test -f $1 -a -f $2 ; then
1058 nx=`grep "^ *nTx *=" $1 | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
1059 sx=`grep "^ & *nSx *=" $2 | sed "s/^ & *nSx *=//" | sed 's/, *$//'`
0179fa2c74 Jean*1060 if test "x$nx" = x ; then
1061 rx=10
1062 else
1063 rx=`expr $sx % $nx`
1064 fi
7ba778f1ca Jean*1065 ny=`grep "^ *nTy *=" $1 | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
1066 sy=`grep "^ & *nSy *=" $2 | sed "s/^ & *nSy *=//" | sed 's/, *$//'`
0179fa2c74 Jean*1067 if test "x$ny" = x ; then
1068 ry=20
1069 else
1070 ry=`expr $sy % $ny`
1071 fi
1072 echo `expr $rx + $ry`
7ba778f1ca Jean*1073 else
0179fa2c74 Jean*1074 echo '-1'
7ba778f1ca Jean*1075 fi
1076 elif [ $# -eq 1 ] ; then
1077 if test -f $1 ; then
1078 nx=`grep "^ *nTx *=" $1 | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
1079 if test "x$nx" = x ; then nx=1 ; fi
1080 ny=`grep "^ *nTy *=" $1 | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
1081 if test "x$ny" = x ; then ny=1 ; fi
1082 #echo $nx $ny
1083 echo $nx
1084 else
1085 echo '-1'
1086 fi
0179fa2c74 Jean*1087 else
1088 echo '-2'
1089 fi
1090
1091 }
1092
2ff82eb834 Ed H*1093 ###############################################################################
1094
1095 # Default properties
1096 debug=0
1097 verbose=1
da8170bd49 Jean*1098 NBLINES_MKLOG=16000
6d54cf9ca1 Ed H*1099
5a67953813 Jean*1100 OptLev=1
232027f18d Jean*1101 GSL=f
6d54cf9ca1 Ed H*1102
1103 CLEANUP=f
ca6d5f1072 Jean*1104 NORUN=f
6d54cf9ca1 Ed H*1105 QUICK=f
416e70d1a2 Jean*1106 NOMAKE=f
6d54cf9ca1 Ed H*1107 NOGENMAKE=f
1108 NOCLEAN=f
1109 NODEPEND=f
bbea11a65d Jean*1110 POSTCLEAN=0
2ff82eb834 Ed H*1111
ac4ed47881 Ed H*1112 BASH=
6d54cf9ca1 Ed H*1113 OPTFILE=NONE
1114 ADDRESSES=
2ff82eb834 Ed H*1115 TESTDIRS=
6d0f07d5b0 Jean*1116 SKIPDIRS=
2ff82eb834 Ed H*1117 MPACKDIR="../tools/mpack-1.6"
002054e5e5 Ed H*1118 HAVE_MPACK=
d6829a17bc Jean*1119 MPACK=
ee57712ddb Jean*1120 SENDCMD=
1121 SAVDIR='.'
4619920a5f Ed H*1122 COMMAND=
ca2316a28b Jean*1123 MKDEPEND=
df038dc180 Ed H*1124 if test "x$MAKE" = x ; then
1125 MAKE=make
1126 fi
72af1157c6 Jean*1127 MAKE_CMD=
df038dc180 Ed H*1128 if test "x$CC" = x ; then
1129 CC=cc
1130 fi
8c9e835c69 Ed H*1131 JOBS=
1f09e8610e Jean*1132 TARG=
d9ae4e2b34 Jean*1133 MPI=0
bbea11a65d Jean*1134 MPI_MFILE=
0e6cc40375 Jean*1135 MULTI_THREAD=f
065c45c70d Jean*1136 OUTDIR=
384dccb29e Ed H*1137 DELDIR=
9750e41317 Jean*1138 USE_R4=
1f09e8610e Jean*1139 EXTRFLG=
72af1157c6 Jean*1140 NOCATAD=
e977410d1b Mart*1141 MKSMALLF=
9d0c386f0c dngo*1142 OADSINGULARITY=
13cadcbe59 Oliv*1143 CHECK_PASS=f
2ff82eb834 Ed H*1144
6418c0ec62 Jean*1145 #- type of testing (KIND):
b4daa24319 Shre*1146 # KIND=0 : forward (= default) ; KIND=6 : Adjoint with OpenAD
1147 # KIND=1 : Tangent-Linear with TAF ; KIND=2 : Adjoint with TAF ;
1148 # KIND=4 : Tang-Lin. with Tapenade ; KIND=5 : Adjoint with Tapenade ;
6418c0ec62 Jean*1149 KIND=0
4619920a5f Ed H*1150
bef69cc95f Jean*1151 # list of pTracers to check for monitor output
a18b9b1964 Ed H*1152 PTRACERS_NUM="1 2 3 4 5"
68c34fd102 Ed H*1153
759f576934 Jean*1154 MATCH_CRIT=10
aaf4336666 Jean*1155
e53112a6cf Ed H*1156 printf "parsing options... "
2ff82eb834 Ed H*1157
1158 ac_prev=
1159 for ac_option ; do
1160
1161 # If the previous option needs an argument, assign it.
1162 if test -n "$ac_prev"; then
1163 eval "$ac_prev=\$ac_option"
1164 ac_prev=
1165 continue
1166 fi
1167
1168 ac_optarg=`expr "x$ac_option" : 'x[^=]*=\(.*\)'`
9750e41317 Jean*1169
2ff82eb834 Ed H*1170 case $ac_option in
49a029e3de Mart*1171
bbea11a65d Jean*1172 -help | --help | -h | --h) usage ;;
1173
1174 -optfile | --optfile | -of | --of) ac_prev=OPTFILE ;;
1175 -optfile=* | --optfile=* | -of=* | --of=*) OPTFILE=$ac_optarg ;;
1176
1177 -addr | --addr | -a | --a) ac_prev=ADDRESSES ;;
1178 -addr=* | --addr=* | -a=* | --a=*) ADDRESSES=$ac_optarg ;;
1179 -mpackdir | --mpackdir | -mpd | --mpd) ac_prev=MPACKDIR ;;
1180 -mpackdir=* | --mpackdir=* | -mpd=* | --mpd=*) MPACKDIR=$ac_optarg ;;
1181
ee57712ddb Jean*1182 -send | --send ) ac_prev=SENDCMD ;;
1183 -send=* | --send=* ) SENDCMD=$ac_optarg ;;
1184 -savdir | --savdir | -sd | --sd ) ac_prev=SAVDIR ;;
1185 -savdir=* | --savdir=* | -sd=* | --sd=* ) SAVDIR=$ac_optarg ;;
1186
bbea11a65d Jean*1187 -tdir | --tdir | -t | --t) ac_prev=TESTDIRS ;;
1188 -tdir=* | --tdir=* | -t=* | --t=*) TESTDIRS=$ac_optarg ;;
1189 -skipdir | --skipdir | -skd | --skd) ac_prev=SKIPDIRS ;;
1190 -skipdir=* | --skipdir=* | -skd=* | --skd=*) SKIPDIRS=$ac_optarg ;;
1191
1192 -bash | --bash | -b | --b) ac_prev=BASH ;;
1193 -bash=* | --bash=* | -b=* | --b=*) BASH=$ac_optarg ;;
1194
1195 -command | --command | -c | --c) ac_prev=COMMAND ;;
1196 -command=* | --command=* | -c=* | --c=*) COMMAND=$ac_optarg ;;
1197
1198 -makedepend | --makedepend | -md | --md) ac_prev=MKDEPEND ;;
1199 -makedepend=* | --makedepend=* | -md=* | --md=*) MKDEPEND=$ac_optarg ;;
1200
1201 -make | --make | -m | --m) ac_prev=MAKE ;;
1202 -make=* | --make=* | -m=* | --m=*) MAKE=$ac_optarg ;;
1203
72af1157c6 Jean*1204 -repl_mk | --repl_mk ) ac_prev=MAKE_CMD ;;
1205 -repl_mk=* | --repl_mk=*) MAKE_CMD=$ac_optarg ;;
462ccb31f3 Jean*1206
bbea11a65d Jean*1207 -odir | --odir) ac_prev=OUTDIR ;;
1208 -odir=* | --odir=*) OUTDIR=$ac_optarg ;;
1209
1210 -ptracers | --ptracers | -ptr | --ptr) ac_prev=PTRACERS_NUM ;;
1211 -ptracers=* | --ptracers=* | -ptr=* | --ptr=*) PTRACERS_NUM=$ac_optarg ;;
a18b9b1964 Ed H*1212
aaf4336666 Jean*1213 -match | --match ) ac_prev=MATCH_CRIT ;;
1214 -match=* | --match=* ) MATCH_CRIT=$ac_optarg ;;
1215
416e70d1a2 Jean*1216 -j | --j) ac_prev=JOBS ;;
1217 -j=* | --j=*) JOBS=$ac_optarg ;;
8c9e835c69 Ed H*1218
1f09e8610e Jean*1219 -ef | --ef) ac_prev=EXTRFLG ;;
1220 -ef=* | --ef=*) EXTRFLG=$ac_optarg ;;
1221
bbea11a65d Jean*1222 -clean | --clean) CLEANUP=t ; DELDIR=t ;;
1223
1224 -norun | --norun | -nr | --nr) NORUN=t ;;
1f09e8610e Jean*1225 -obj | --obj ) TARG='obj' ; NORUN=t ;;
f6209765b3 Jean*1226 -src | --src ) TARG='small_f' ; NORUN=t ;;
bbea11a65d Jean*1227 -runonly | --runonly | -ro | --ro) QUICK=t ; NOMAKE=t ;;
1228 -quick | --quick | -q | --q) QUICK=t ;;
1229 -nogenmake | --nogenmake | -ng | --ng) NOGENMAKE=t ;;
1230 -noclean | --noclean | -nc | --nc) NOCLEAN=t ;;
1231 -nodepend | --nodepend | -nd | --nd) NODEPEND=t ;;
1232
1233 -postclean | --postclean | -pc | --pc) POSTCLEAN=2 ;;
1234 -deloutp | --deloutp | -do | --do) POSTCLEAN=1 ;;
0b035b108c Ed H*1235
13cadcbe59 Oliv*1236 -pass) CHECK_PASS=t ;;
1237
d9ae4e2b34 Jean*1238 -mpi | --mpi) MPI=2 ;;
1239 -MPI | --MPI) ac_prev=MPI ;;
1240 -MPI=* | --MPI=*) MPI=$ac_optarg ;;
6d54cf9ca1 Ed H*1241
bbea11a65d Jean*1242 -mfile | --mfile | -mf | --mf) ac_prev=MPI_MFILE ;;
1243 -mfile=* | --mfile=* | -mf=* | --mf=*) MPI_MFILE=$ac_optarg ;;
1244
0e6cc40375 Jean*1245 -mth) MULTI_THREAD=t ;;
1246
b4daa24319 Shre*1247 -tlm) if test $KIND = 0 -o $KIND = 3 ; then KIND=`expr $KIND + 1`; else
1248 echo "Error: '-tlm', '-adm' and '-oad' are exclusive + no duplicate" ; usage
1249 fi ;;
1250 -adm | -ad) if test $KIND = 0 -o $KIND = 3 ; then KIND=`expr $KIND + 2` ; else
1251 echo "Error: '-tlm', '-adm' and '-oad' are exclusive + no duplicate" ; usage
6418c0ec62 Jean*1252 fi ;;
b4daa24319 Shre*1253 -tap) if [ $KIND -le 2 ] ; then KIND=`expr $KIND + 3` ; else
1254 echo "Error: '-tap' and '-oad' are exclusive + no duplicate" ; usage
6418c0ec62 Jean*1255 fi ;;
b4daa24319 Shre*1256 -oad) if test $KIND = 0 ; then KIND=6 ; NODEPEND=t ; else
1257 echo "Error: '-tlm', '-adm' and '-oad' are exclusive + no duplicate" ; usage
6418c0ec62 Jean*1258 fi ;;
9d0c386f0c dngo*1259 -oadsingularity | --oadsingularity | -oadsngl | --oadsngl) ac_prev=OADSINGULARITY ;;
1260 -oadsingularity=* | --oadsingularity=* | -oadsngl=* | --oadsngl=*) OADSINGULARITY=$ac_optarg ;;
1261
72af1157c6 Jean*1262 -ncad) NOCATAD=t ;;
e977410d1b Mart*1263 -small_f) MKSMALLF=t ;;
3907106aba Jean*1264
5a67953813 Jean*1265 -ieee) echo "Warning: ignore option '-ieee' (already the default)"
6418c0ec62 Jean*1266 printf " ... " ;;
5a67953813 Jean*1267 -noieee) echo "Warning: will use option '-fast' instead of '-noieee' (obsolete)"
6418c0ec62 Jean*1268 printf " ... " ; OptLev=`expr $OptLev \* 2` ;;
5a67953813 Jean*1269 -fast) OptLev=`expr $OptLev \* 2` ;;
1270 -devel) OptLev=0 ;;
bbea11a65d Jean*1271 -gsl) GSL=t ;;
6d54cf9ca1 Ed H*1272
2ff82eb834 Ed H*1273 -verbose) verbose=2 ;;
1274 -debug) debug=1 ;;
1275 -quiet) verbose=0 ;;
1276
384dccb29e Ed H*1277 -deldir | -dd) DELDIR=t ;;
1278
416e70d1a2 Jean*1279 -use_r4|-ur4) USE_R4=t ;;
a986ef8661 Cons*1280
9750e41317 Jean*1281 -ts) TS=t;;
a986ef8661 Cons*1282 -papis) PAPIS=t;;
72af1157c6 Jean*1283 -pcls) PCLS=t;;
a986ef8661 Cons*1284
bbea11a65d Jean*1285 -*) echo "Error: unrecognized option: "$ac_option
1286 usage ;;
1287 *) echo "Error: unrecognized argument: "$ac_option
1288 usage ;;
9750e41317 Jean*1289
2ff82eb834 Ed H*1290 esac
9750e41317 Jean*1291
2ff82eb834 Ed H*1292 done
1293
6d54cf9ca1 Ed H*1294 if test "x$QUICK" = xt ; then
1295 NOGENMAKE=t
1296 NOCLEAN=t
1297 NODEPEND=t
1298 fi
72af1157c6 Jean*1299 if test "x$MAKE_CMD" = x ; then MAKE_CMD=$MAKE ; fi
6d54cf9ca1 Ed H*1300
bbea11a65d Jean*1301 #- check length of MPI machine file:
1302 if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then
1303 if test -r $MPI_MFILE ; then
1304 nl=`wc -l $MPI_MFILE | awk '{print $1}'`
1305 if [ $nl -lt $MPI ] ; then
6418c0ec62 Jean*1306 echo "Error: need at least $MPI nodes (currently only $nl) in MPI_MFILE=$MPI_FILE"
1307 usage
bbea11a65d Jean*1308 fi
1309 if [ $verbose -gt 1 ]; then
1310 echo " MPI_MFILE=$MPI_MFILE : $nl procs for MPI=$MPI run"
1311 fi
1312 else
6418c0ec62 Jean*1313 echo "Error: cannot access MPI_MFILE=$MPI_FILE"
1314 usage
bbea11a65d Jean*1315 fi
1316 fi
1317
b4daa24319 Shre*1318 #- setting for forward, TLM or ADM testing
6418c0ec62 Jean*1319 if test $KIND = 1 ; then
c59dd234b1 Jean*1320 if test "x$TARG" = x ; then TARG=ftlall ; fi
1321 if test "x$TARG" = xobj ; then TARG=ftlobj ; fi
1322 if test "x$TARG" = xsmall_f ; then TARG=ftltaf ; fi
6418c0ec62 Jean*1323 code_dir=code_ad
1324 inputdir=input_ad
1325 ref_outp="output_tlm.txt"
1326 EXECUTABLE="mitgcmuv_ftl"
1327 elif test $KIND = 2 ; then
f6209765b3 Jean*1328 if test "x$TARG" = x ; then TARG=adall ; fi
1329 if test "x$TARG" = xobj ; then TARG=adobj ; fi
1330 if test "x$TARG" = xsmall_f ; then TARG=adtaf ; fi
6d41b7da3e Jean*1331 code_dir=code_ad
878c588496 Jean*1332 inputdir=input_ad
6d41b7da3e Jean*1333 ref_outp="output_adm.txt"
1334 EXECUTABLE="mitgcmuv_ad"
b4daa24319 Shre*1335 elif test $KIND = 4 -o $KIND = 5 ; then
1336 if test $KIND = 4 ; then TARG=tap_tlm ; else TARG=tap_adj ; fi
1337 code_dir=code_tap
1338 inputdir=input_tap
1339 ref_outp="output_${TARG}.txt"
1340 EXECUTABLE="mitgcmuv_${TARG}"
1341 elif test $KIND = 6 ; then
f9b75e9bda Jean*1342 TARG=adAll
3907106aba Jean*1343 code_dir=code_oad
1344 inputdir=input_oad
1345 ref_outp="output_oadm.txt"
1346 EXECUTABLE="mitgcmuv_ad"
6d41b7da3e Jean*1347 else
1348 code_dir=code
878c588496 Jean*1349 inputdir=input
6d41b7da3e Jean*1350 ref_outp="output.txt"
1351 EXECUTABLE="mitgcmuv"
1352 fi
72af1157c6 Jean*1353 if test "x$JOBS" != x ; then TARG="-j $JOBS $TARG" ; fi
6d41b7da3e Jean*1354
b4daa24319 Shre*1355 if [ $verbose -gt 1 ]; then
1356 echo ""
1357 echo "--- print $0 setting:"
1358 echo " KIND = '$KIND'"
1359 echo " TARG = '$TARG'"
1360 echo " code_dir = '$code_dir'"
1361 echo " inputdir = '$inputdir'"
1362 echo " ref_outp = '$ref_outp'"
1363 echo " EXECUTABLE= '$EXECUTABLE'"
1364 echo "--- printing ends."
1365 #exit 0
1366 fi
1367
ed9f439d26 Jean*1368 xx=`echo $TESTDIRS | awk '{print $1}'`
2ff82eb834 Ed H*1369 if test "x$TESTDIRS" = x ; then
456c314cce Jean*1370 LIST=`scandirs results/$ref_outp`
ed9f439d26 Jean*1371 elif test $xx = 'start_from' ; then
1372 xx=`echo $TESTDIRS | awk '{print $2}'`
1373 LIST=`scandirs results/$ref_outp | sed -n "/$xx/,$ p"`
35aa6741f4 Jean*1374 else
1375 #- expand group of experiments:
1376 LIST=" "
1377 for xx in $TESTDIRS
1378 do
1379 case $xx in
c4ead643ab Jean*1380 'basic') LIST=${LIST}" aim.5l_cs hs94.128x64x5 ideal_2D_oce"
1381 LIST=${LIST}" lab_sea tutorial_baroclinic_gyre"
1382 LIST=${LIST}" tutorial_global_oce_latlon tutorial_plume_on_slope"
35aa6741f4 Jean*1383 ;;
1384 'tutorials')
1385 LIST=${LIST}" "`ls | grep 'tutorial_'` ;;
1386 *) LIST=${LIST}" "$xx ;;
1387 esac
9750e41317 Jean*1388 done
6d0f07d5b0 Jean*1389 fi
1390 #echo 'LIST='${LIST}'<'
1391 #- skip dirs, remove duplicate and non-directory:
1392 TESTDIRS=" "
1393 count=0
1394 for xx in $LIST
1395 do
1396 yy=`echo $SKIPDIRS | grep -c $xx`
1397 if test $yy = 0 ; then
35aa6741f4 Jean*1398 if test -d $xx ; then
1399 yy=`echo $TESTDIRS | grep -c $xx`
1400 if test $yy = 0 ; then TESTDIRS=${TESTDIRS}" "$xx ; fi
6d0f07d5b0 Jean*1401 else count=1 ;
1402 echo ""; echo -n " -- skip \"$xx\" (not a directory !)"
35aa6741f4 Jean*1403 fi
6d0f07d5b0 Jean*1404 else
6418c0ec62 Jean*1405 if test $count = 1 ; then echo -n ", \"$xx\""
6d0f07d5b0 Jean*1406 else count=1 ; echo "" ; echo -n " skip: \"$xx\""
1407 fi
1408 fi
9750e41317 Jean*1409 done
6d0f07d5b0 Jean*1410 if test $count = 1 ; then echo "" ; echo -n " ... " ; fi
35aa6741f4 Jean*1411 #echo 'TESTDIRS='${TESTDIRS}'<'
2ff82eb834 Ed H*1412
2856d356e3 Jean*1413 LOC_MFILE='mpi_mfile.loc'
0093035fc0 Jean*1414 RUNLOG="run.tr_log"
442de1f446 Jean*1415 if test "x$MPI" = x0 ; then
1416 OUTPUTFILE=$ref_outp
1417 if test "x$COMMAND" = x ; then COMMAND="./$EXECUTABLE > $OUTPUTFILE" ; fi
1418 else
1419 OUTPUTFILE="STDOUT.0000"
75c0ee3505 Jean*1420 if test "x$COMMAND" = x ; then COMMAND="mpirun -np TR_NPROC ./$EXECUTABLE" ; fi
84370bfea3 Jean*1421 fi
4619920a5f Ed H*1422
442de1f446 Jean*1423 echo "OK (COMMAND='$COMMAND')"
2ff82eb834 Ed H*1424
72af1157c6 Jean*1425 #TMP=./tr_$$
ee57712ddb Jean*1426 #- try to put temporary files in system-local /tmp dir
72af1157c6 Jean*1427 TMP=/tmp/tr_${USER}_$$
1428 touch $TMP ; retVal=$?
1429 if [ $retVal -eq 0 ] ; then
1430 if test ! -r $TMP ; then TMP=./tr_$$ ; fi
1431 else
1432 TMP=./tr_$$
1433 fi
1434 rm -f $TMP
1435 if [ $verbose -gt 1 ]; then echo " temp files: $TMP" ; fi
ee57712ddb Jean*1436
eb7e5e62ed Jean*1437 # set the Default List of output variables to be checked:
1438 # (use default or load experiment-specific list from file "tr_checklist")
1439 # content : 1rst = main variable used to decide if it pass or FAIL
1440 # others = number of matching digits to be printed in summary.txt
d81415648f Jean*1441 if test $KIND = 0 ; then
eb7e5e62ed Jean*1442 DEF_CHECK_LIST='PS PS T+ S+ U+ V+ pt1+ pt2+ pt3+ pt4+ pt5+'
1443 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
4d91a93b49 Jean*1444 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
eb7e5e62ed Jean*1445 ii=`echo $EMPTY_RESULTS | awk '{print NF}'`
4d91a93b49 Jean*1446 EMPTY_RESULTS=$EMPTY_RESULTS`expr $LEN_CHECK_LIST - $ii | awk 'BEGIN{FS=":"}{for(i=1;i<=$1;i++){printf " ."}}'`
d81415648f Jean*1447 elif test $KIND = 2 ; then
1448 DEF_CHECK_LIST='admGrd admCst admGrd admFwd T+ S+ U+ V+'
1449 EMPTY_RESULTS='.. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. ..'
1450 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
1451 else
1452 DEF_CHECK_LIST='admGrd admCst admGrd admFwd'
1453 EMPTY_RESULTS='.. .. ..'
1454 LEN_CHECK_LIST=`echo $DEF_CHECK_LIST | sed 's/ [a-zA-Z0-9]*+/&mn &mx &av &sd/g' | awk '{print NF-1}'`
eb7e5e62ed Jean*1455 fi
1456
2ff82eb834 Ed H*1457 # create the FORTRAN comparison code
122c9245be Jean*1458 if test "x$CLEANUP" = xt -o -x tr_cmpnum ; then
ca6d5f1072 Jean*1459 echo "skipping comparison code build"
1460 else
1461 createcodelet
1462 fi
2ff82eb834 Ed H*1463
63e0800ef7 Jean*1464 # build the mpack utility (if ADDRESSES = NONE, do it to test the build)
ee57712ddb Jean*1465 if test "x$ADDRESSES" = x -o "x$SENDCMD" != x ; then
7a89945018 Ed H*1466 echo "skipping mpack build"
1467 else
9cfcd12778 Ed H*1468 build_mpack
ee57712ddb Jean*1469 if test "x$HAVE_MPACK" = xt ; then SENDCMD=$MPACK ; fi
9cfcd12778 Ed H*1470 fi
2ff82eb834 Ed H*1471
1472 # Create a uniquely named directory to store results
e72086803c Jean*1473 CMDLINE=$0
6c32747881 Jean*1474 for xx in "$@" ; do nw=`echo $xx | wc -w`
27d53f6f29 Jean*1475 if test $nw = '1' ; then CMDLINE="$CMDLINE $xx" ; else
1476 nb=`echo $xx | grep -c '='`
1477 if test $nb = 0 ; then CMDLINE="$CMDLINE '$xx'"
1478 else yy=`echo "$xx'" | sed "s/=/='/"` ;
1479 CMDLINE="$CMDLINE $yy" ; fi
1480 fi
6c32747881 Jean*1481 done
2ff82eb834 Ed H*1482 MACH=`hostname`
7d86f89c7f Ed H*1483 UNAMEA=`uname -a`
2ff82eb834 Ed H*1484 DATE=`date +%Y%m%d`
54db3dc364 Ed H*1485 BASE="tr_"$MACH"_"$DATE"_"
065c45c70d Jean*1486 if test "x$OUTDIR" != x ; then
1487 BASE="tr_"$OUTDIR"_"$DATE"_"
276c0f056b Jean*1488 else
fb06fe5592 Mart*1489 #short_name=`hostname -s | tr '[:upper:]' '[:lower:]'`
1490 # hostname -s is not universal (does work on AIX system)
72af1157c6 Jean*1491 short_name=`hostname | sed 's/\..*$//' | tr '[:upper:]' '[:lower:]'`
276c0f056b Jean*1492 BASE="tr_"$short_name"_"$DATE"_"
065c45c70d Jean*1493 fi
2ff82eb834 Ed H*1494 DNUM=0
1495 DRESULTS="$BASE$DNUM"
1496 while test -e $DRESULTS ; do
1497 DNUM=$(( $DNUM + 1 ))
1498 DRESULTS="$BASE$DNUM"
1499 done
1500 mkdir $DRESULTS
1501 RETVAL=$?
1502 if test "x$RETVAL" != x0 ; then
002054e5e5 Ed H*1503 echo "ERROR: Can't create results directory \"./$DRESULTS\""
2ff82eb834 Ed H*1504 exit 1
1505 fi
1506 SUMMARY="$DRESULTS/summary.txt"
67e2869886 Ed H*1507 start_date=`date`
b46c5fdcd4 Ed H*1508 echo $start_date > $SUMMARY
e72086803c Jean*1509 echo 'run:' $CMDLINE >> $SUMMARY
1510 echo 'on :' $UNAMEA >> $SUMMARY
2ff82eb834 Ed H*1511
893b53ecae Ed H*1512 of_path=
6d54cf9ca1 Ed H*1513 if test "x$OPTFILE" != xNONE ; then
1514 if test -r $OPTFILE ; then
893b53ecae Ed H*1515 # get the path
1516 path=${OPTFILE%/*}
1517 if test "x$path" = x ; then
1518 of_path=`pwd`
1519 else
1520 of_path=`( cd $path > /dev/null 2>&1 ; pwd )`
1521 fi
1522 file=${OPTFILE##*/}
1523 OPTFILE=$of_path/$file
2995826769 Ed H*1524 cp $OPTFILE $DRESULTS
1525 echo >> $SUMMARY
1526 echo " OPTFILE=$OPTFILE" >> $SUMMARY
893b53ecae Ed H*1527 else
7509d1d274 Jean*1528 echo | tee -a $SUMMARY
1529 echo "ERROR: can't read OPTFILE=\"$OPTFILE\"" | tee -a $SUMMARY
2995826769 Ed H*1530 exit 1
2ff82eb834 Ed H*1531 fi
2995826769 Ed H*1532 else
1533 echo >> $SUMMARY
935c582112 Jean*1534 echo "No \"OPTFILE\" was specified ; genmake2 found and uses:" >> $SUMMARY
1535 #-note: to be filled later after 1rst run
6d54cf9ca1 Ed H*1536 fi
1537 echo
1538 echo >> $SUMMARY
6418c0ec62 Jean*1539 if test $KIND = 0 ; then
1540 line_0=`printf '%s %2i' 'default' $MATCH_CRIT`
eb7e5e62ed Jean*1541 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
68c34fd102 Ed H*1542 line_1="G D M c m s m s m s m s"
4d66dcbdcc Jean*1543 line_2="e p a R g m m e . m m e . m m e . m m e ."
1544 line_3="n n k u 2 i a a d i a a d i a a d i a a d"
68c34fd102 Ed H*1545 line_4="2 d e n d n x n . n x n . n x n . n x n ."
a18b9b1964 Ed H*1546 for ii in $PTRACERS_NUM ; do
68c34fd102 Ed H*1547 line_0="$line_0 --PTR 0"$ii"--"
1548 line_1="$line_1 m s"
1549 line_2="$line_2 m m e ."
1550 line_3="$line_3 i a a d"
1551 line_4="$line_4 n x n ."
1552 done
6418c0ec62 Jean*1553 else
1554 if test $KIND = 1 ; then
fb1e235660 Jean*1555 echo "TangLin generated by TAF" >> $SUMMARY
1556 elif test $KIND = 2 ; then
1557 echo "Adjoint generated by TAF" >> $SUMMARY
b4daa24319 Shre*1558 elif test $KIND = 4 ; then
1559 echo "TangLin generated by Tapenade" >> $SUMMARY
1560 elif test $KIND = 5 ; then
1561 echo "Adjoint generated by Tapenade" >> $SUMMARY
fb1e235660 Jean*1562 else
1563 echo "Adjoint generated by OpenAD" >> $SUMMARY
1564 fi
d81415648f Jean*1565 line_0=`printf '%s %2i' 'default ' $MATCH_CRIT`
b4daa24319 Shre*1566 if test $KIND = 1 -o $KIND = 4 ; then
6418c0ec62 Jean*1567 line_1="G D M C T F"
1568 line_2="e p a R o L D"
1569 else
1570 line_1="G D M C A F"
1571 line_2="e p a R o d D"
1572 fi
1573 line_3="n n k u s G G"
1574 line_4="2 d e n t r r"
1575 echo >> $SUMMARY
d81415648f Jean*1576 if test $KIND = 2 ; then
1577 line_0=`printf '%s %2i ' 'default ' $MATCH_CRIT`
1578 line_0="$line_0 ----T----- ----S----- ----U----- ----V-----"
1579 line_1="$line_1 m s m s m s m s"
1580 line_2="$line_2 m m e . m m e . m m e . m m e ."
1581 line_3="$line_3 i a a d i a a d i a a d i a a d"
1582 line_4="$line_4 n x n . n x n . n x n . n x n ."
1583 fi
6418c0ec62 Jean*1584 fi
122c9245be Jean*1585 if test "x$CLEANUP" != xt ; then
68c34fd102 Ed H*1586 echo "$line_0" | tee -a $SUMMARY
1587 echo "$line_1" | tee -a $SUMMARY
1588 echo "$line_2" | tee -a $SUMMARY
1589 echo "$line_3" | tee -a $SUMMARY
1590 echo "$line_4" | tee -a $SUMMARY
6418c0ec62 Jean*1591 echo "" | tee -a $SUMMARY
122c9245be Jean*1592 fi
6fcdccb64d Jean*1593 echo "-------------------------------------------------------------------------------"
6d54cf9ca1 Ed H*1594
13cadcbe59 Oliv*1595 allpass=t
1596
6d54cf9ca1 Ed H*1597 # ...and each test directory...
1598 for dir in $TESTDIRS ; do
9750e41317 Jean*1599
7e8ef1f316 Jean*1600 # set builddir & rundir:
1601 builddir="build"
1602 if test ! -d $dir/$builddir ; then mkdir $dir/$builddir ; fi
1603 rundir="run"
cecd4018b3 Jean*1604 pfxdir="tr_$rundir"
7e8ef1f316 Jean*1605 if test ! -d $dir/$rundir ; then
1606 rundir=$builddir
1607 fi
1608 CODE_DIR=$dir/$code_dir
1609 BUILD_DIR=$dir/$builddir
1610
6d54cf9ca1 Ed H*1611 # Cleanup only!
1612 if test "x$CLEANUP" = xt ; then
642fbd44e7 Jean*1613 echo -n ' --- dir:' $BUILD_DIR ': '
1614 makeclean $BUILD_DIR
38c4b22527 Jean*1615 ( cd $BUILD_DIR
1616 rm -f $EXECUTABLE *.bak
0093035fc0 Jean*1617 rm -f genmake_state genmake_*optfile genmake.log
d9ae4e2b34 Jean*1618 rm -f SIZE.h.mpi genmake.tr_log make.tr_log
e6f2a663b8 Jean*1619 rm -rf mpi_headers
38c4b22527 Jean*1620 )
9527bfb820 Jean*1621 if test -d $dir/$rundir ; then
6418c0ec62 Jean*1622 echo -n ' --- dir:' $dir/$rundir ': '
7e8ef1f316 Jean*1623 run_clean $dir/$rundir
1c1109930c Ed H*1624 fi
cecd4018b3 Jean*1625 trdir=`( cd $dir ; find . -type d -name "$pfxdir.*" -print | sed 's/^.\///')`
642fbd44e7 Jean*1626 ttd=`echo $trdir | wc -w`
1627 if test $ttd != 0 ; then
1628 echo ' --- rm dir:' $trdir
1629 ( cd $dir ; rm -rf $trdir )
1630 fi
6d54cf9ca1 Ed H*1631 continue
1632 fi
1c1109930c Ed H*1633
9750e41317 Jean*1634 # Verify that the testdir exists and contains previous
6d54cf9ca1 Ed H*1635 # results in the correct location--or skip this directory!
0d2e560266 Jean*1636 fout=$dir"/results/"$ref_outp
6418c0ec62 Jean*1637 #if test ! -r $fout ; then
1638 if test ! -r $fout -a ! -r ${fout}.gz ; then
4619920a5f Ed H*1639 echo "can't read \"$fout\" -- skipping $dir"
6d54cf9ca1 Ed H*1640 continue
1641 fi
2ff82eb834 Ed H*1642
bef69cc95f Jean*1643 # Check for specific files for particular type of run
68c34fd102 Ed H*1644
7ba778f1ca Jean*1645 if test ! -r $CODE_DIR"/SIZE.h_mpi" -a "x$MPI" != "x0" ; then
1646 echo "can't find \"$CODE_DIR/SIZE.h_mpi\" -- skipping $dir"
1647 continue
1648 fi
1649 if test ! -r $dir"/input/eedata.mth" -a "x$MULTI_THREAD" = "xt" ; then
1650 echo "can't find \"$dir/input/eedata.mth\" -- skipping $dir"
1651 continue
1652 fi
1653
0baeafc4ac Jean*1654 if test "x$MPI" = "x0" ; then
1655 LOC_NPROC=1
1656 else
6c95586363 Jean*1657 ntx=1 ; nty=1
7ba778f1ca Jean*1658 if test "x$MULTI_THREAD" = "xt" ; then
54f370a421 Jean*1659 ff=$dir"/input/eedata.mth"
1660 ntx=`grep "^ *nTx *=" $ff | tail -1 | sed 's/^ *nTx *= *//' | sed "s/, *$//"`
1661 nty=`grep "^ *nTy *=" $ff | tail -1 | sed 's/^ *nTy *= *//' | sed "s/, *$//"`
1662 if test "x$ntx" = x ; then ntx=1 ; fi
1663 if test "x$nty" = x ; then nty=1 ; fi
d9ae4e2b34 Jean*1664 fi
7ba778f1ca Jean*1665 #- create new SIZE.h with no more than '$MPI' Procs
6c95586363 Jean*1666 mk_mpi_size $CODE_DIR"/SIZE.h_mpi" $BUILD_DIR"/tr_size.mpi" $MPI $ntx $nty
7ba778f1ca Jean*1667 LOC_NPROC=$?
1668 ( cd $BUILD_DIR
1669 if test -r SIZE.h.mpi ; then
1670 cmp tr_size.mpi SIZE.h.mpi > /dev/null 2>&1 ; RETVAL=$?
1671 else RETVAL=1
1672 fi
1673 if test "x$RETVAL" = x0 ; then
1674 rm -f tr_size.mpi
1675 else
1676 rm -f SIZE.h.mpi ; mv tr_size.mpi SIZE.h.mpi
1677 fi
1678 )
bbea11a65d Jean*1679 if test "x$MPI_MFILE" != x ; then
1680 #- create new MPI machine-file with the right number of Procs
2856d356e3 Jean*1681 rm -f $dir/$LOC_MFILE
1682 cat $MPI_MFILE | sort | uniq | head -$LOC_NPROC > $dir/$LOC_MFILE
1683 nl=`wc -l $dir/$LOC_MFILE | awk '{print $1}'`
bbea11a65d Jean*1684 if [ $nl -lt $LOC_NPROC ] ; then
2856d356e3 Jean*1685 rm -f $dir/$LOC_MFILE
1686 cat $MPI_MFILE | head -$LOC_NPROC > $dir/$LOC_MFILE
1687 #sed -n "1,$LOC_NPROC p" $MPI_MFILE > $dir/$LOC_MFILE
bbea11a65d Jean*1688 fi
1689 if [ $verbose -gt 1 ]; then
1690 nl=`wc -l $LOC_MFILE | awk '{print $1}'`
2856d356e3 Jean*1691 echo " new LOC_MFILE=$dir/$LOC_MFILE : $nl procs for LOC_NPROC=$LOC_NPROC"
bbea11a65d Jean*1692 fi
1693 fi
7ba778f1ca Jean*1694 if test "x$MULTI_THREAD" = "xt" ; then
1695 retv=`check_eedata $dir"/input/eedata.mth" $BUILD_DIR"/SIZE.h.mpi"`
1696 if test $retv != 0 ; then
1697 echo "input/eedata.mth tiling misfit -- skipping $dir"
1698 continue
1699 fi
d9ae4e2b34 Jean*1700 fi
0179fa2c74 Jean*1701 fi
0e6cc40375 Jean*1702
1703 # Check whether there are "extra runs" for this testdir
1704 extra_runs=
ca6d5f1072 Jean*1705 if test "x$NORUN" = xf ; then
fedbb6c3d7 Jean*1706 ex_run_dirs=`( cd $dir ; ls -d $inputdir.* 2> /dev/null )`
ca6d5f1072 Jean*1707 fi
878c588496 Jean*1708 #echo "ex_run_dirs='$ex_run_dirs'"
1709 for exd in $ex_run_dirs ; do
1710 name=`echo $exd | sed -e "s/$inputdir\.//"`
1711 refExOut=`echo $ref_outp | sed "s/\./.${name}./"`
1712 outf="$dir/results/$refExOut"
6418c0ec62 Jean*1713 if test -r $outf -o -r ${outf}.gz ; then
9750e41317 Jean*1714 if test "x$MULTI_THREAD" = "xt" ; then
0179fa2c74 Jean*1715 if test -r $dir"/"$exd"/eedata.mth" ; then
d9ae4e2b34 Jean*1716 if test "x$MPI" = "x0" ; then
1717 extra_runs="$extra_runs $name"
1718 else
7ba778f1ca Jean*1719 retv=`check_eedata $dir"/"$exd"/eedata.mth" $BUILD_DIR"/SIZE.h.mpi"`
0179fa2c74 Jean*1720 if test $retv = 0 ; then
0e6cc40375 Jean*1721 extra_runs="$extra_runs $name"
0179fa2c74 Jean*1722 else
1723 echo $exd"/eedata.mth tiling misfit -- skipping $dir"
0e6cc40375 Jean*1724 fi
0179fa2c74 Jean*1725 fi
1726 #else echo $dir"/"$exd"/eedata.mth: not found"
0e6cc40375 Jean*1727 fi
0179fa2c74 Jean*1728 else
1729 extra_runs="$extra_runs $name"
1730 fi
878c588496 Jean*1731 fi
1732 done
b0b995d6ae Ed H*1733
1734 echo
9750e41317 Jean*1735 if test "x$extra_runs" = "x" ; then
6418c0ec62 Jean*1736 echo "Experiment: $dir"
0e6cc40375 Jean*1737 else
6418c0ec62 Jean*1738 echo "Experiment: $dir ; extra_runs=$extra_runs"
0e6cc40375 Jean*1739 fi
b0b995d6ae Ed H*1740 echo
1741 unset genmake makedepend make run
eb7e5e62ed Jean*1742 results=$EMPTY_RESULTS
b0b995d6ae Ed H*1743
360fa2f691 Jean*1744 # Create an output dir & summary.txt file for each tested experiment (tdir)
577d52ba66 Jean*1745 locDIR=$DRESULTS"/"$dir
1746 mkdir $locDIR
360fa2f691 Jean*1747 #- report to this experiment local summary file ---
1748 echo "DATE='$DATE' ; tdir='$dir'" > $locDIR"/summary.txt"
1749 echo "MACH='$MACH'" >> $locDIR"/summary.txt"
1750 echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt"
577d52ba66 Jean*1751 CDIR=`pwd`"/$locDIR"
9750e41317 Jean*1752
ca6d5f1072 Jean*1753 if test "x$NORUN" = xt ; then
1754 run=N
1755 genmakemodel $dir/$builddir && genmake=Y \
1756 && makeclean $dir/$builddir \
6418c0ec62 Jean*1757 && symlink_mpifiles $dir $code_dir $builddir \
ca6d5f1072 Jean*1758 && makedependmodel $dir/$builddir && makedepend=Y \
1759 && makemodel $dir/$builddir && make=Y
c67b26333b Jean*1760 echo
6d54cf9ca1 Ed H*1761 else
2ff82eb834 Ed H*1762 genmakemodel $dir/$builddir && genmake=Y \
1763 && makeclean $dir/$builddir \
6418c0ec62 Jean*1764 && symlink_mpifiles $dir $code_dir $builddir \
2ff82eb834 Ed H*1765 && makedependmodel $dir/$builddir && makedepend=Y \
1766 && makemodel $dir/$builddir && make=Y \
6fcdccb64d Jean*1767 && run_clean $dir/$rundir \
abed800b6d Jean*1768 && linkdata $dir/$rundir $inputdir \
474019363f Ed H*1769 && runmodel $dir/$rundir && run=Y \
6d41b7da3e Jean*1770 && results=`testoutput_run $dir $rundir $ref_outp`
c67b26333b Jean*1771 echo 1>&2
6d54cf9ca1 Ed H*1772 fi
ca6d5f1072 Jean*1773 #echo "results='$results'"
6fcdccb64d Jean*1774
4619920a5f Ed H*1775 fres=`formatresults $dir ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
6418c0ec62 Jean*1776 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
577d52ba66 Jean*1777 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt"
13cadcbe59 Oliv*1778 if [[ ! "$fres" =~ " pass " ]]; then
1779 allpass=f
1780 fi
e53112a6cf Ed H*1781
1782 for ex in $extra_runs ; do
c6cea69b38 Jean*1783 unset run
6418c0ec62 Jean*1784 results=$EMPTY_RESULTS
7e8ef1f316 Jean*1785 # reference output file
1786 refExOut=`echo $ref_outp | sed "s/\./.${ex}./g"`
360fa2f691 Jean*1787 # Create an output dir & summary.txt file for each extra run (tdir.ex)
577d52ba66 Jean*1788 locDIR=$DRESULTS"/"$dir"."$ex
1789 mkdir $locDIR
360fa2f691 Jean*1790 #- report to this experiment local summary file ---
1791 echo "DATE='$DATE' ; tdir='$dir.$ex'" > $locDIR"/summary.txt"
1792 #echo "MACH='$MACH'" >> $locDIR"/summary.txt"
1793 #echo "UNAMEA='$UNAMEA'" >> $locDIR"/summary.txt"
577d52ba66 Jean*1794 CDIR=`pwd`"/$locDIR"
cecd4018b3 Jean*1795 test ! -e "$dir/$pfxdir.$ex" && mkdir "$dir/$pfxdir.$ex"
1796 run_clean $dir/$pfxdir.$ex
1797 linkdata $dir/$pfxdir.$ex $inputdir.$ex $inputdir
1798 runmodel $dir/$pfxdir.$ex && run=Y \
1799 && results=`testoutput_run $dir $pfxdir.$ex $refExOut`
c67b26333b Jean*1800 echo 1>&2
cc019522d9 Jean*1801
f561fdaba7 Jean*1802 fres=`formatresults $dir.$ex ${genmake:-N} ${makedepend:-N} ${make:-N} ${run:-N} $results`
c5e604105c Jean*1803 echo "$fres" | sed 's/ 99/ --/g' | sed 's/ > />/' | sed 's/ < /</' >> $SUMMARY
577d52ba66 Jean*1804 echo "fresults='$fres'" | sed 's/ 99/ --/g' >> $locDIR"/summary.txt"
13cadcbe59 Oliv*1805 if [[ ! "$fres" =~ " pass " ]]; then
1806 allpass=f
1807 fi
bbea11a65d Jean*1808 if test "x$POSTCLEAN" = x2 ; then
cecd4018b3 Jean*1809 run_clean $dir/$pfxdir.$ex
0e6cc40375 Jean*1810 fi
e53112a6cf Ed H*1811 done
0b035b108c Ed H*1812
6aa14c32e4 Jean*1813 if test ! -f $DRESULTS"/"genmake_state ; then
c14ab91977 Jean*1814 if test -f $dir/$builddir/Makefile ; then
1815 mkOpt=`grep '^# OPTFILE=' $dir/$builddir/Makefile 2>/dev/null | head -1 | sed 's/^# //'`
1816 echo "from '$dir/$builddir/Makefile', extract:" > $DRESULTS/genmake_state
fb06fe5592 Mart*1817 # sed -n '/^# executed by:/,+1 p' $dir/$builddir/Makefile >> $DRESULTS/genmake_state
1818 # bsd-sed cannot do the above code
1819 cat $dir/$builddir/Makefile | \
deb0ad3aea Mart*1820 sed -n '/^# executed by:/{N
1821 p
1822 }' >> $DRESULTS/genmake_state
fe7601e9ab Jean*1823 echo " $mkOpt" >> $DRESULTS/genmake_state
935c582112 Jean*1824 if test "x$OPTFILE" = xNONE ; then
1825 eval $mkOpt
fb06fe5592 Mart*1826 # sed "/^No \"OPTFILE\" was specified ; genmake2/a\ OPTFILE=${OPTFILE}"\
1827 # $SUMMARY > tmp.tr_log
1828 # bsd-sed requires a newline after "a\":
1829 sed "/^No \"OPTFILE\" was specified ; genmake2/a\\
1830 OPTFILE=${OPTFILE}" $SUMMARY > tmp.tr_log
935c582112 Jean*1831 RETVAL=$?
ee57712ddb Jean*1832 if test "x$RETVAL" = x0 ; then
1833 cp -f tmp.tr_log $SUMMARY
935c582112 Jean*1834 fi
ee57712ddb Jean*1835 rm -f tmp.tr_log
935c582112 Jean*1836 fi
497802755c Jean*1837 gmkLog=$dir/$builddir/genmake.log
6aa14c32e4 Jean*1838 if test -r $gmkLog ; then
1839 grep '^Get compiler version using:' $gmkLog > /dev/null 2>&1
1840 RETVAL=$?
1841 if test "x$RETVAL" = x0 ; then
8188c8aec7 Jean*1842 echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state
6aa14c32e4 Jean*1843 echo "extract compiler version:" >> $DRESULTS/genmake_state
1844 sed -n '/Get compiler version/,/<-- compiler version/p' \
1845 $gmkLog | grep -v '^... compiler version ' > tmp.tr_log
8188c8aec7 Jean*1846 sed -n '1p' tmp.tr_log >> $DRESULTS/genmake_state
6aa14c32e4 Jean*1847 sed -n '2,/^$/p' tmp.tr_log | sed '/^$/d' | sed 's/^./ &/' \
8188c8aec7 Jean*1848 >> $DRESULTS/genmake_state
6aa14c32e4 Jean*1849 rm -f tmp.tr_log
1850 fi
516b08a580 jm-c 1851 grep ' set FC_CHECK=' $gmkLog >> $DRESULTS/genmake_state
b48bc6023a Jean*1852 fi
e1cc724aa4 Jean*1853 if test $KIND = 1 -o $KIND = 2 ; then
1854 gmkLog=$dir/$builddir/taf_ad.log
1855 if test $KIND = 1 ; then gmkLog=$dir/$builddir/taf_ftl.log ; fi
1856 if test -f $gmkLog ; then
1857 echo -n "from '$gmkLog', get: " >> $DRESULTS/genmake_state
1858 head -1 $gmkLog | sed 's/^.*Algorithms in Fortran //' \
1859 >> $DRESULTS/genmake_state
1860 ADvers=`head -1 $gmkLog | awk '{print $7,$8}'`
1861 sed "s/ by TAF/ by TAF $ADvers/" $SUMMARY > tmp.tr_log
1862 mv -f tmp.tr_log $SUMMARY
1863 fi
1864 fi
1865 if test $KIND = 4 -o $KIND = 5 ; then
1866 gmkLog=$dir/$builddir/make.tr_log
1867 if test -f $gmkLog ; then
1868 ADtool=`grep '^Tapenade ' $gmkLog | tail -n 1`
1869 echo "from '$gmkLog', get: $ADtool" >> $DRESULTS/genmake_state
d4a066fa68 Jean*1870 #ADvers=`echo $ADtool | awk '{print $2,$3}'`
1871 ADvers=`echo $ADtool | sed -e 's/^Tapenade //' -e 's/ [0-9]*:[0-9][0-9] .*$//'`
212a55051e Jean*1872 sed "s/ by Tapenade/ by Tapenade $ADvers/" $SUMMARY > tmp.tr_log
e1cc724aa4 Jean*1873 mv -f tmp.tr_log $SUMMARY
1874 fi
1875 fi
b48bc6023a Jean*1876 gmkLog=$dir/$builddir/genmake_state
1877 if test -r $gmkLog ; then
8188c8aec7 Jean*1878 echo -n "from '$gmkLog', " >> $DRESULTS/genmake_state
1879 echo "get genmake settings:" >> $DRESULTS/genmake_state
b48bc6023a Jean*1880 sed -n '/^HAVE_/p' $gmkLog | sed 's/^./ &/' \
1881 >> $DRESULTS/genmake_state
8188c8aec7 Jean*1882 sed -n '/^THIS[A-Z]*=/p' $gmkLog >> $DRESULTS/genmake_state
497802755c Jean*1883 fi
c14ab91977 Jean*1884 fi
1885 fi
0e6cc40375 Jean*1886 #postclean $dir/$builddir
bbea11a65d Jean*1887 if test "x$POSTCLEAN" = x2 ; then
6418c0ec62 Jean*1888 makeclean $dir/$builddir \
1889 && run_clean $dir/$rundir
0e6cc40375 Jean*1890 fi
2856d356e3 Jean*1891 if test "x$MPI" != x0 -a "x$MPI_MFILE" != x ; then rm -f $dir/$LOC_MFILE ; fi
9750e41317 Jean*1892
6d54cf9ca1 Ed H*1893 echo "-------------------------------------------------------------------------------"
9750e41317 Jean*1894
2ff82eb834 Ed H*1895 done
e05307b8c4 Jean*1896 grep '^HAVE_LAPACK' */$builddir/genmake_state 2> /dev/null \
1897 | head -1 >> $DRESULTS/genmake_state
2ff82eb834 Ed H*1898
e53112a6cf Ed H*1899 printf "Start time: " >> $SUMMARY
97166278cd Jean*1900 echo "$start_date" >> $SUMMARY
e53112a6cf Ed H*1901 printf "End time: " >> $SUMMARY
e5e26554e5 Ed H*1902 date >> $SUMMARY
1903
002054e5e5 Ed H*1904 # If addresses were supplied and mpack built successfully, then try
1905 # to send email using mpack.
1906 if test "x$ADDRESSES" = xNONE -o "x$ADDRESSES" = x ; then
1907 echo "No results email was sent."
1908 else
ee57712ddb Jean*1909 if test "x$SENDCMD" != x ; then
c908a600ca Jean*1910 sendOpt='' ; nb=`echo $SENDCMD | grep -c '\<scp\>'`
1911 if [ $nb -eq 0 ] ; then sendOpt='-s MITgcm-test -m 3555000' ; fi
ee57712ddb Jean*1912 if [ $verbose -gt 1 ]; then
c908a600ca Jean*1913 echo " run: $SENDCMD $sendOpt ${SAVDIR}/${DRESULTS}".tar.gz" $ADDRESSES"
ee57712ddb Jean*1914 fi
1915 tar -cf ${SAVDIR}/${DRESULTS}".tar" $DRESULTS > /dev/null 2>&1 \
1916 && gzip ${SAVDIR}/${DRESULTS}".tar" \
c908a600ca Jean*1917 && $SENDCMD $sendOpt ${SAVDIR}/${DRESULTS}".tar.gz" $ADDRESSES
002054e5e5 Ed H*1918 RETVAL=$?
1919 if test "x$RETVAL" != x0 ; then
1920 echo
30f4fad812 Jean*1921 echo "Warning: The tar, gzip, & $SENDCMD step failed. Please send email"
002054e5e5 Ed H*1922 echo " to <MITgcm-support@mitgcm.org> for help. You may copy the "
1923 echo " summary of results from the directory \"$DRESULTS\"."
1924 echo
1925 else
1926 echo
1927 echo "An email containing results was sent to the following addresses:"
1928 echo " \"$ADDRESSES\""
1929 echo
ee57712ddb Jean*1930 test -f ${SAVDIR}/${DRESULTS}".tar" && rm -f ${SAVDIR}/${DRESULTS}".tar"
1931 test -f ${SAVDIR}/${DRESULTS}".tar.gz" && rm -f ${SAVDIR}/${DRESULTS}".tar.gz"
002054e5e5 Ed H*1932 fi
1933 fi
1934 fi
1935
ca6d5f1072 Jean*1936 if test "x$QUICK" = xf -a "x$NORUN" = xf ; then
1937 rm -f tr_cmpnum.c tr_cmpnum
1938 fi
2ff82eb834 Ed H*1939
474019363f Ed H*1940 if test "x$CLEANUP" != xt ; then
3de6a095b5 Jean*1941 cat $SUMMARY | sed 's/ \. \. \. \. \. \. \. \. \. \. \. \. //'
54db3dc364 Ed H*1942 if test -e tr_out.txt ; then
6418c0ec62 Jean*1943 mv tr_out.txt tr_out.txt.old
5ac39639c8 Ed H*1944 fi
456c314cce Jean*1945 cat $SUMMARY | sed '/^[YN] [YN] [YN] [YN]/ s/ \. //g' > tr_out.txt
474019363f Ed H*1946 fi
2ff82eb834 Ed H*1947
384dccb29e Ed H*1948 if test "x$DELDIR" = xt ; then
1949 rm -rf $DRESULTS
1950 fi
13cadcbe59 Oliv*1951
1952 if test "$CHECK_PASS" = t && test "$allpass" = f; then
1953 exit 1
1954 fi
1955
122c9245be Jean*1956 echo "======== End of testreport execution ========"
